RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 GJB5O95377 273 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 RPLP2P05387 115 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 RETP07949 1114 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 MYL6BP14649 208 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 KLRK1P26718 216 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 ADRA1BP35368 520 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 AK2P54819 239 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 SESN2P58004 480 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 WDR5P61964 334 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 RAB1AP62820 205 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 IRX3P78415 501 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 DEFB103AP81534 67 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 LONRF1Q17RB8 773 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 ZNF528Q3MIS6 628 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 LONRF3Q496Y0 759 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 KHDC1Q4VXA5 237 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 STPG1Q5TH74 334 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 HIST2H2BCQ6DN03 193 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 LAIR1Q6GTX8 287 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 APOA5Q6Q788 366 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 Q6ZUG5 572 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 SRLQ86TD4 932 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 ZBTB44Q8NCP5 570 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 FBXO15Q8NCQ5 510 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 C3orf20Q8ND61 904 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 IFI44Q8TCB0 444 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 ZNF480Q8WV37 535 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 LRTOMTQ8WZ04 291 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 KCNN1Q92952 543 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 SIGLEC10Q96LC7 697 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 YTHDC1Q96MU7 727 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 TBCBQ99426 244 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 VRK1Q99986 396 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 SPATA25Q9BR10 227 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 PAGR1Q9BTK6 254 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 C22orf23Q9BZE7 217 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 KATNBL1Q9H079 304 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 LDAHQ9H6V9 325 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 MANSC1Q9H8J5 431 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 RSAD1Q9HA92 442 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 BCO1Q9HAY6 547 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 RAB23Q9ULC3 237 aa5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 CTDP1Q9Y5B0 961 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-223ENST00000534442 SYNRGQ9UMZ2 1314 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 SMCHD1A6NHR9 2005 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 CFAP69A5D8W1 941 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 ETV2O00321 342 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 BAIAP3O94812 1187 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 PIK3CBP42338 1070 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 ATP8B2P98198 1209 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 TLE1Q04724 770 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 SCAPQ12770 1279 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 GRB14Q14449 540 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 PLS1Q14651 629 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 SSPNQ14714 243 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 VWA3BQ502W6 1294 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 XRRA1Q6P2D8 792 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 TSHZ1Q6ZSZ6 1077 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 HEATR3Q7Z4Q2 680 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 FAM83AQ86UY5 434 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 PQLC1Q8N2U9 271 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 PLA2G15Q8NCC3 412 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 OR7D4Q8NG98 312 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 CCHCR1Q8TD31 782 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 AJUBAQ96IF1 538 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 TMX3Q96JJ7 454 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 MYD88Q99836 296 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 FTOQ9C0B1 505 aaKnown RBP eCLIP5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 KIAA1683Q9H0B3 1180 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 L2HGDHQ9H9P8 463 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 ZMAT3Q9HA38 289 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 LMBRD1Q9NUN5 540 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 ZSCAN32Q9NX65 697 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 RTEL1Q9NZ71 1219 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 DLGAP2Q9P1A6 1054 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 IL17BQ9UHF5 180 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 RRP7AQ9Y3A4 280 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 KIAA1217Q5T5P2 1943 aa5.32□□□□□ -1.56
ECHDC1-223ENST00000534442 MYADML2A6NDP7 307 aa5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 C2CD4DB7Z1M9 353 aa5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 B8ZZF3 427 aa5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 H3BUI4 141 aa5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 FOXD2O60548 495 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 ZNF888P0CJ79 500 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 MYF5P13349 255 aa5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 TYRP14679 529 aa5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 MALP21145 153 aa5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 CSF2RBP32927 897 aa5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 GUCY1A2P33402 732 aa5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 KIR2DL3P43628 341 aa5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 CCT4P50991 539 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 HMGCS2P54868 508 aa5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 WNT3AP56704 352 aa5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 CSTF1Q05048 431 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 FGL2Q14314 439 aa5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 RAB39AQ14964 217 aa5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 MTHFSDQ2M296 383 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 CCDC157Q569K6 752 aa5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 SKAP1Q86WV1 359 aa5.31□□□□□ -1.56
ECHDC1-223ENST00000534442 REXO1L1PQ8IX06 675 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms