RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 SMPD4Q9NXE4 827 aa8.9□□□□□ -0.98
RPUSD4-209ENST00000534393 IL37Q9NZH6 218 aa8.9□□□□□ -0.98
RPUSD4-209ENST00000534393 USP25Q9UHP3 1055 aa8.9□□□□□ -0.98
RPUSD4-209ENST00000534393 PCDHA7Q9UN72 937 aa8.9□□□□□ -0.98
RPUSD4-209ENST00000534393 NME7Q9Y5B8 376 aa8.9□□□□□ -0.98
RPUSD4-209ENST00000534393 LNP1A1A4G5 178 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 FAM92AA1XBS5 289 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 CLDN5O00501 218 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 TNFRSF10BO14763 440 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 IKBKBO14920 756 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 HOXC11O43248 304 aaPredicted RBP8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 COCHO43405 550 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 KIF20AO95235 890 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 KLF8O95600 359 aaPredicted RBP8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 C4BPAP04003 597 aaKnown RBP8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 SLFN14P0C7P3 912 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 HOXD12P35452 270 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 TIE1P35590 1138 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 P2RY2P41231 377 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 KIR2DL1P43626 348 aaPredicted RBP8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 AFMP43652 599 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 CACNA2D1P54289 1103 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 IFRD2Q12894 506 aaPredicted RBP8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 LMAN2Q12907 356 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 GAB4Q2WGN9 574 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 LY6G5CQ5SRR4 150 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 RESP18Q5W5W9 173 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 CAVIN1Q6NZI2 390 aaKnown RBP8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 FAM35AQ86V20 835 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 UNC93AQ86WB7 457 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 TTC30AQ86WT1 665 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 CRYBG2Q8N1P7 616 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 ALLCQ8N6M5 410 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 IL17RCQ8NAC3 791 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 TXNDC5Q8NBS9 432 aaKnown RBP8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 MDGA1Q8NFP4 955 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 KCNK16Q96T55 309 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 BLZF1Q9H2G9 400 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 SMOC1Q9H4F8 434 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 TLR8Q9NR97 1041 aaKnown RBP8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 TMEM30AQ9NV96 361 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 DMAC2Q9NW81 257 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 BCCIPQ9P287 314 aaKnown RBP eCLIP8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 DEC1Q9P2X7 70 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 CHORDC1Q9UHD1 332 aaPredicted RBP8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 EVLQ9UI08 416 aaPredicted RBP8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 FRMD4BQ9Y2L6 1034 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 ADAMTS9Q9P2N4 1935 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 FAM208BQ5VWN6 2430 aa8.89□□□□□ -0.99
RPUSD4-209ENST00000534393 CHD6Q8TD26 2715 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 TBC1D3BA6NDS4 549 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 C4orf47A7E2U8 309 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 SGK1O00141 431 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 PDXKO00764 312 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 TLR5O60602 858 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 TULP3O75386 442 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 AP1G2O75843 785 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 KRT37O76014 449 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 ZDHHC11BP0C7U3 371 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 CEACAM1P13688 526 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 CSRP1P21291 193 aaKnown RBP8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 ATP5C1P36542 298 aaKnown RBP8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 SLC6A11P48066 632 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 DHPSP49366 369 aaPredicted RBP8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 NOVA1P51513 510 aaKnown RBP8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 SLC5A3P53794 718 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 CDH8P55286 799 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 CUL4BQ13620 913 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 ZACNQ401N2 412 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 TCEAL6Q6IPX3 200 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 SDE2Q6IQ49 451 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 PSAPL1Q6NUJ1 521 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 TMEM92Q6UXU6 159 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 SLC36A4Q6YBV0 504 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 HTR3DQ70Z44 454 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 RABEPKQ7Z6M1 372 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 ACOT1Q86TX2 421 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 SYT12Q8IV01 421 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 ETFBKMTQ8IXQ9 262 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 FUKQ8N0W3 1084 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 PGBD3Q8N328 593 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 SCAMP5Q8TAC9 235 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 TMC2Q8TDI7 906 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 PIGKQ92643 395 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 TCEAL3Q969E4 200 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 CCDC47Q96A33 483 aaKnown RBP8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 XPO6Q96QU8 1125 aaKnown RBP8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 NUSAP1Q9BXS6 441 aaKnown RBP8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 IMPG2Q9BZV3 1241 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 SMYD3Q9H7B4 428 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 CSNK1G1Q9HCP0 422 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 SPHK2Q9NRA0 654 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 KRT82Q9NSB4 513 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 EXOC1Q9NV70 894 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 WDR35Q9P2L0 1181 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 LSM7Q9UK45 103 aaKnown RBP8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 INVSQ9Y283 1065 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 STARD13Q9Y3M8 1113 aa8.88□□□□□ -0.99
RPUSD4-209ENST00000534393 A0A1W2PQ27 194 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms