RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 TMEM176AQ96HP8 235 aa24.59■■□□□ 1.53
YIF1A-213ENST00000534374 CEP63Q96MT8 703 aa24.59■■□□□ 1.53
YIF1A-213ENST00000534374 UBXN6Q9BZV1 441 aa24.59■■□□□ 1.53
YIF1A-213ENST00000534374 SLC8A2Q9UPR5 921 aa24.59■■□□□ 1.53
YIF1A-213ENST00000534374 SDK1Q7Z5N4 2213 aa24.59■■□□□ 1.53
YIF1A-213ENST00000534374 CACNA1AO00555 2505 aa24.58■■□□□ 1.53
YIF1A-213ENST00000534374 TLR5O60602 858 aa24.58■■□□□ 1.53
YIF1A-213ENST00000534374 CYP17A1P05093 508 aa24.58■■□□□ 1.53
YIF1A-213ENST00000534374 KIF11P52732 1056 aa24.58■■□□□ 1.53
YIF1A-213ENST00000534374 ZNF394Q53GI3 561 aa24.58■■□□□ 1.53
YIF1A-213ENST00000534374 PPP1R26Q5T8A7 1209 aaPredicted RBP24.58■■□□□ 1.53
YIF1A-213ENST00000534374 EZH1Q92800 747 aaPredicted RBP24.58■■□□□ 1.53
YIF1A-213ENST00000534374 SLC35C1Q96A29 364 aa24.58■■□□□ 1.53
YIF1A-213ENST00000534374 CYLDQ9NQC7 956 aa24.58■■□□□ 1.53
YIF1A-213ENST00000534374 SH3BP1Q9Y3L3 701 aa24.58■■□□□ 1.53
YIF1A-213ENST00000534374 DCHS1Q96JQ0 3298 aa24.58■■□□□ 1.52
YIF1A-213ENST00000534374 PMM2O15305 246 aa24.57■■□□□ 1.52
YIF1A-213ENST00000534374 ADH1CP00326 375 aa24.57■■□□□ 1.52
YIF1A-213ENST00000534374 CD44P16070 742 aaKnown RBP24.57■■□□□ 1.52
YIF1A-213ENST00000534374 ACO1P21399 889 aaKnown RBP24.57■■□□□ 1.52
YIF1A-213ENST00000534374 EIF2DP41214 584 aaKnown RBP24.57■■□□□ 1.52
YIF1A-213ENST00000534374 PGFP49763 221 aa24.57■■□□□ 1.52
YIF1A-213ENST00000534374 RAD23BP54727 409 aa24.57■■□□□ 1.52
YIF1A-213ENST00000534374 SIM2Q14190 667 aaPredicted RBP24.57■■□□□ 1.52
YIF1A-213ENST00000534374 HEATR6Q6AI08 1181 aaKnown RBP24.57■■□□□ 1.52
YIF1A-213ENST00000534374 LAIR1Q6GTX8 287 aa24.57■■□□□ 1.52
YIF1A-213ENST00000534374 ISM2Q6H9L7 571 aa24.57■■□□□ 1.52
YIF1A-213ENST00000534374 KLHDC10Q6PID8 442 aa24.57■■□□□ 1.52
YIF1A-213ENST00000534374 SYT13Q7L8C5 426 aa24.57■■□□□ 1.52
YIF1A-213ENST00000534374 ZNF276Q8N554 614 aa24.57■■□□□ 1.52
YIF1A-213ENST00000534374 SLC4A11Q8NBS3 891 aa24.57■■□□□ 1.52
YIF1A-213ENST00000534374 NACA2Q9H009 215 aa24.57■■□□□ 1.52
YIF1A-213ENST00000534374 GMEB2Q9UKD1 530 aa24.57■■□□□ 1.52
YIF1A-213ENST00000534374 USP3Q9Y6I4 520 aa24.57■■□□□ 1.52
YIF1A-213ENST00000534374 A0A0A0MRY4 1105 aa24.56■■□□□ 1.52
YIF1A-213ENST00000534374 PPP1R3GB7ZBB8 358 aa24.56■■□□□ 1.52
YIF1A-213ENST00000534374 GADD45BO75293 160 aaPredicted RBP24.56■■□□□ 1.52
YIF1A-213ENST00000534374 ATP5C1P36542 298 aaKnown RBP24.56■■□□□ 1.52
YIF1A-213ENST00000534374 PSEN1P49768 467 aa24.56■■□□□ 1.52
YIF1A-213ENST00000534374 MORC3Q14149 939 aa24.56■■□□□ 1.52
YIF1A-213ENST00000534374 ARHGAP17Q68EM7 881 aa24.56■■□□□ 1.52
YIF1A-213ENST00000534374 GPRIN1Q7Z2K8 1008 aa24.56■■□□□ 1.52
YIF1A-213ENST00000534374 RPLP0P6Q8NHW5 317 aa24.56■■□□□ 1.52
YIF1A-213ENST00000534374 ACDQ96AP0 544 aa24.56■■□□□ 1.52
YIF1A-213ENST00000534374 K7EQS6 105 aa24.55■■□□□ 1.52
YIF1A-213ENST00000534374 BMP6P22004 513 aa24.55■■□□□ 1.52
YIF1A-213ENST00000534374 HTR3DQ70Z44 454 aa24.55■■□□□ 1.52
YIF1A-213ENST00000534374 CCDC186Q7Z3E2 898 aa24.55■■□□□ 1.52
YIF1A-213ENST00000534374 ARID3AQ99856 593 aa24.55■■□□□ 1.52
YIF1A-213ENST00000534374 KLF16Q9BXK1 252 aaPredicted RBP24.55■■□□□ 1.52
YIF1A-213ENST00000534374 DMXL1Q9Y485 3027 aa24.54■■□□□ 1.52
YIF1A-213ENST00000534374 BICDL2A1A5D9 508 aa24.54■■□□□ 1.52
YIF1A-213ENST00000534374 TBX18O95935 607 aa24.54■■□□□ 1.52
YIF1A-213ENST00000534374 RETP07949 1114 aa24.54■■□□□ 1.52
YIF1A-213ENST00000534374 YWHAEP62258 255 aaKnown RBP24.54■■□□□ 1.52
YIF1A-213ENST00000534374 GAD2Q05329 585 aa24.54■■□□□ 1.52
YIF1A-213ENST00000534374 CUL2Q13617 745 aa24.54■■□□□ 1.52
YIF1A-213ENST00000534374 TTI2Q6NXR4 508 aa24.54■■□□□ 1.52
YIF1A-213ENST00000534374 PRR23BQ6ZRT6 265 aa24.54■■□□□ 1.52
YIF1A-213ENST00000534374 ANKRD52Q8NB46 1076 aa24.54■■□□□ 1.52
YIF1A-213ENST00000534374 PNKPQ96T60 521 aa24.54■■□□□ 1.52
YIF1A-213ENST00000534374 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.54■■□□□ 1.52
YIF1A-213ENST00000534374 OSER1Q9NX31 292 aa24.54■■□□□ 1.52
YIF1A-213ENST00000534374 MYO18AQ92614 2054 aaKnown RBP24.54■■□□□ 1.52
YIF1A-213ENST00000534374 SPAG17Q6Q759 2223 aa24.53■■□□□ 1.52
YIF1A-213ENST00000534374 SCAMP3O14828 347 aaKnown RBP24.53■■□□□ 1.52
YIF1A-213ENST00000534374 CYP26A1O43174 497 aa24.53■■□□□ 1.52
YIF1A-213ENST00000534374 ADH5P11766 374 aa24.53■■□□□ 1.52
YIF1A-213ENST00000534374 TBXAS1P24557 533 aaPredicted RBP24.53■■□□□ 1.52
YIF1A-213ENST00000534374 HOXC13P31276 330 aa24.53■■□□□ 1.52
YIF1A-213ENST00000534374 FMO5P49326 533 aa24.53■■□□□ 1.52
YIF1A-213ENST00000534374 SLC8A3P57103 927 aa24.53■■□□□ 1.52
YIF1A-213ENST00000534374 MRPS21P82921 87 aaKnown RBP24.53■■□□□ 1.52
YIF1A-213ENST00000534374 LY6G5CQ5SRR4 150 aa24.53■■□□□ 1.52
YIF1A-213ENST00000534374 TADA2BQ86TJ2 420 aa24.53■■□□□ 1.52
YIF1A-213ENST00000534374 USP33Q8TEY7 942 aa24.53■■□□□ 1.52
YIF1A-213ENST00000534374 NELFBQ8WX92 580 aa24.53■■□□□ 1.52
YIF1A-213ENST00000534374 JAKMIP2Q96AA8 810 aa24.53■■□□□ 1.52
YIF1A-213ENST00000534374 NMUR1Q9HB89 426 aa24.53■■□□□ 1.52
YIF1A-213ENST00000534374 CLIC5Q9NZA1 410 aa24.53■■□□□ 1.52
YIF1A-213ENST00000534374 EBF1Q9UH73 591 aa24.53■■□□□ 1.52
YIF1A-213ENST00000534374 KIAA1257Q9ULG3 409 aa24.53■■□□□ 1.52
YIF1A-213ENST00000534374 A0A1W2PQH9 124 aa24.52■■□□□ 1.52
YIF1A-213ENST00000534374 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.52■■□□□ 1.52
YIF1A-213ENST00000534374 P4HA2O15460 535 aa24.52■■□□□ 1.52
YIF1A-213ENST00000534374 LRP3O75074 770 aa24.52■■□□□ 1.52
YIF1A-213ENST00000534374 RARGP13631 454 aa24.52■■□□□ 1.52
YIF1A-213ENST00000534374 TGM1P22735 817 aa24.52■■□□□ 1.52
YIF1A-213ENST00000534374 PLA2G4AP47712 749 aa24.52■■□□□ 1.52
YIF1A-213ENST00000534374 SLC6A11P48066 632 aa24.52■■□□□ 1.52
YIF1A-213ENST00000534374 GOLGA8FQ08AF8 430 aa24.52■■□□□ 1.52
YIF1A-213ENST00000534374 GOLGA8DPQ0D2H9 430 aa24.52■■□□□ 1.52
YIF1A-213ENST00000534374 SRSF5Q13243 272 aaKnown RBP24.52■■□□□ 1.52
YIF1A-213ENST00000534374 DMC1Q14565 340 aa24.52■■□□□ 1.52
YIF1A-213ENST00000534374 PREPLQ4J6C6 727 aaPredicted RBP24.52■■□□□ 1.52
YIF1A-213ENST00000534374 KLHL10Q6JEL2 608 aa24.52■■□□□ 1.52
YIF1A-213ENST00000534374 BBS7Q8IWZ6 715 aa24.52■■□□□ 1.52
YIF1A-213ENST00000534374 GAB3Q8WWW8 586 aa24.52■■□□□ 1.52
YIF1A-213ENST00000534374 CDK5RAP1Q96SZ6 601 aaKnown RBP24.52■■□□□ 1.52
YIF1A-213ENST00000534374 SPHK2Q9NRA0 654 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms