RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 MARCH8Q5T0T0 291 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 SFMBT2Q5VUG0 894 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 IQCEQ6IPM2 695 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 EFCAB12Q6NXP0 572 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 PKN3Q6P5Z2 889 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 ABHD17CQ6PCB6 329 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 MTHFD1LQ6UB35 978 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 CRELD2Q6UXH1 353 aaPredicted RBP6.12□□□□□ -1.43
CHKA-208ENST00000533910 C15orf39Q6ZRI6 1047 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 RRAGAQ7L523 313 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 RNF149Q8NC42 400 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 GSTCDQ8NEC7 633 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 TRPV1Q8NER1 839 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 FRS2Q8WU20 508 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 LMBR1Q8WVP7 490 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 TRIB2Q92519 343 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 KAT2BQ92831 832 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 SAAL1Q96ER3 474 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 TCTN2Q96GX1 697 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 CAPNS2Q96L46 248 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 C8orf48Q96LL4 319 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 EIF3CQ99613 913 aaKnown RBP6.12□□□□□ -1.43
CHKA-208ENST00000533910 ARHGAP39Q9C0H5 1083 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 HAPLN2Q9GZV7 340 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 TMEM117Q9H0C3 514 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 INTS2Q9H0H0 1204 aaKnown RBP6.12□□□□□ -1.43
CHKA-208ENST00000533910 UPF3AQ9H1J1 476 aaKnown RBP6.12□□□□□ -1.43
CHKA-208ENST00000533910 DUSP15Q9H1R2 295 aaPredicted RBP6.12□□□□□ -1.43
CHKA-208ENST00000533910 NHEJ1Q9H9Q4 299 aaPredicted RBP6.12□□□□□ -1.43
CHKA-208ENST00000533910 TMEM8AQ9HCN3 771 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 PTPRHQ9HD43 1115 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 NLRC4Q9NPP4 1024 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 CLEC1BQ9P126 229 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 CNTNAP2Q9UHC6 1331 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 RAXQ9Y2V3 346 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 SF3B6Q9Y3B4 125 aaKnown RBP6.12□□□□□ -1.43
CHKA-208ENST00000533910 EPN1Q9Y6I3 576 aaPredicted RBP6.12□□□□□ -1.43
CHKA-208ENST00000533910 SCINQ9Y6U3 715 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 NRCAMQ92823 1304 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 KRTAP9-6A0A140TA67 174 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 CCDC189A1A4V9 331 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 GOLGA8IPA6NC78 632 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 C2orf71A6NGG8 1288 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 RRN3P2A6NIE6 340 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 ZNF233A6NK53 670 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 GOLGA8JA6NMD2 632 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 F8VZ95 297 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 ACKR2O00590 384 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 AURKAO14965 403 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 ZNF263O14978 683 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 DUSP11O75319 330 aaKnown RBP6.11□□□□□ -1.43
CHKA-208ENST00000533910 LDHAP00338 332 aaKnown RBP6.11□□□□□ -1.43
CHKA-208ENST00000533910 F13BP05160 661 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 GJB1P08034 283 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 PLEKP08567 350 aaPredicted RBP6.11□□□□□ -1.43
CHKA-208ENST00000533910 JMJD7P0C870 316 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 KLRC1P26715 233 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 TMOD1P28289 359 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 PSMC4P43686 418 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 GCLMP48507 274 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 GPC3P51654 580 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 KIF11P52732 1056 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 NLRP11P59045 1033 aaKnown RBP6.11□□□□□ -1.43
CHKA-208ENST00000533910 GABREP78334 506 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 KRT83P78385 493 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 ADAM17P78536 824 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 CAP1Q01518 475 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 PRKCZQ05513 592 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 CETN1Q12798 172 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 MAP4K2Q12851 820 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 GRM1Q13255 1194 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 RAPGEF1Q13905 1077 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 ASIC2Q16515 512 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 MAPK6Q16659 721 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 DEFB115Q30KQ5 88 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 SLC9C1Q4G0N8 1177 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 DNTTIP2Q5QJE6 756 aaKnown RBP6.11□□□□□ -1.43
CHKA-208ENST00000533910 PRAMEF19Q5SWL8 479 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 KRT39Q6A163 491 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 MPZL3Q6UWV2 235 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 ZNF410Q86VK4 478 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 RHPN2Q8IUC4 686 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 FMNL3Q8IVF7 1028 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 CCDC103Q8IW40 242 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 BRSK2Q8IWQ3 736 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 PPIL6Q8IXY8 311 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 AFAP1L2Q8N4X5 818 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 ATL2Q8NHH9 583 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 OLIG1Q8TAK6 271 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 SNRNP27Q8WVK2 155 aaKnown RBP6.11□□□□□ -1.43
CHKA-208ENST00000533910 PTPRN2Q92932 1015 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 ZBTB10Q96DT7 871 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 NLRP4Q96MN2 994 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 TSPAN18Q96SJ8 248 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 CGRRF1Q99675 332 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 ACO2Q99798 780 aaKnown RBP6.11□□□□□ -1.43
CHKA-208ENST00000533910 FAM213AQ9BRX8 229 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 SYT11Q9BT88 431 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 MSTO1Q9BUK6 570 aa6.11□□□□□ -1.43
CHKA-208ENST00000533910 KATNAL1Q9BW62 490 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms