RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 ZNF263O14978 683 aa20.82■□□□□ 0.92
CHEK1-215ENST00000533778 COCHO43405 550 aa20.82■□□□□ 0.92
CHEK1-215ENST00000533778 LSM8O95777 96 aaKnown RBP20.82■□□□□ 0.92
CHEK1-215ENST00000533778 MBL2P11226 248 aaPredicted RBP20.82■□□□□ 0.92
CHEK1-215ENST00000533778 RARGP13631 454 aa20.82■□□□□ 0.92
CHEK1-215ENST00000533778 TCF3P15923 654 aa20.82■□□□□ 0.92
CHEK1-215ENST00000533778 FERP16591 822 aa20.82■□□□□ 0.92
CHEK1-215ENST00000533778 ATP5C1P36542 298 aaKnown RBP20.82■□□□□ 0.92
CHEK1-215ENST00000533778 PBX1P40424 430 aa20.82■□□□□ 0.92
CHEK1-215ENST00000533778 YWHAGP61981 247 aaKnown RBP eCLIP20.82■□□□□ 0.92
CHEK1-215ENST00000533778 PDCLQ13371 301 aa20.82■□□□□ 0.92
CHEK1-215ENST00000533778 CC2D1AQ6P1N0 951 aaPredicted RBP20.82■□□□□ 0.92
CHEK1-215ENST00000533778 KLHDC10Q6PID8 442 aa20.82■□□□□ 0.92
CHEK1-215ENST00000533778 SCD5Q86SK9 330 aa20.82■□□□□ 0.92
CHEK1-215ENST00000533778 TMEM110Q86TL2 294 aa20.82■□□□□ 0.92
CHEK1-215ENST00000533778 NOP9Q86U38 636 aaKnown RBP20.82■□□□□ 0.92
CHEK1-215ENST00000533778 GPIHBP1Q8IV16 184 aa20.82■□□□□ 0.92
CHEK1-215ENST00000533778 KIAA1958Q8N8K9 716 aa20.82■□□□□ 0.92
CHEK1-215ENST00000533778 ZNF397Q8NF99 534 aaPredicted RBP20.82■□□□□ 0.92
CHEK1-215ENST00000533778 IRF7Q92985 503 aa20.82■□□□□ 0.92
CHEK1-215ENST00000533778 RNF38Q9H0F5 515 aa20.82■□□□□ 0.92
CHEK1-215ENST00000533778 NMUR1Q9HB89 426 aa20.82■□□□□ 0.92
CHEK1-215ENST00000533778 DOCK6Q96HP0 2047 aa20.82■□□□□ 0.92
CHEK1-215ENST00000533778 CFHP08603 1231 aa20.81■□□□□ 0.92
CHEK1-215ENST00000533778 GPC5P78333 572 aa20.81■□□□□ 0.92
CHEK1-215ENST00000533778 PLCB2Q00722 1185 aa20.81■□□□□ 0.92
CHEK1-215ENST00000533778 CDR2Q01850 454 aa20.81■□□□□ 0.92
CHEK1-215ENST00000533778 SIGLEC14Q08ET2 396 aa20.81■□□□□ 0.92
CHEK1-215ENST00000533778 FCHO2Q0JRZ9 810 aa20.81■□□□□ 0.92
CHEK1-215ENST00000533778 GRM2Q14416 872 aa20.81■□□□□ 0.92
CHEK1-215ENST00000533778 ARHGAP29Q52LW3 1261 aa20.81■□□□□ 0.92
CHEK1-215ENST00000533778 TAF3Q5VWG9 929 aa20.81■□□□□ 0.92
CHEK1-215ENST00000533778 BTBD8Q5XKL5 378 aa20.81■□□□□ 0.92
CHEK1-215ENST00000533778 PASD1Q8IV76 773 aa20.81■□□□□ 0.92
CHEK1-215ENST00000533778 MSANTD4Q8NCY6 345 aa20.81■□□□□ 0.92
CHEK1-215ENST00000533778 DDX1Q92499 740 aaKnown RBP20.81■□□□□ 0.92
CHEK1-215ENST00000533778 BAP1Q92560 729 aa20.81■□□□□ 0.92
CHEK1-215ENST00000533778 KHSRPQ92945 711 aaKnown RBP eCLIP20.81■□□□□ 0.92
CHEK1-215ENST00000533778 PPP1R13BQ96KQ4 1090 aa20.81■□□□□ 0.92
CHEK1-215ENST00000533778 TRIM62Q9BVG3 475 aa20.81■□□□□ 0.92
CHEK1-215ENST00000533778 NUCKS1Q9H1E3 243 aaKnown RBP20.81■□□□□ 0.92
CHEK1-215ENST00000533778 CCSER2Q9H7U1 834 aa20.81■□□□□ 0.92
CHEK1-215ENST00000533778 BRD9Q9H8M2 597 aa20.81■□□□□ 0.92
CHEK1-215ENST00000533778 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.81■□□□□ 0.92
CHEK1-215ENST00000533778 WNT16Q9UBV4 365 aa20.81■□□□□ 0.92
CHEK1-215ENST00000533778 CCL26Q9Y258 94 aa20.81■□□□□ 0.92
CHEK1-215ENST00000533778 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.81■□□□□ 0.923e-7■□□□□ 8.2
CHEK1-215ENST00000533778 CPQQ9Y646 472 aa20.81■□□□□ 0.92
CHEK1-215ENST00000533778 A0A1W2PQJ5 194 aa20.8■□□□□ 0.92
CHEK1-215ENST00000533778 CHADO15335 359 aa20.8■□□□□ 0.92
CHEK1-215ENST00000533778 NARSO43776 548 aaKnown RBP20.8■□□□□ 0.92
CHEK1-215ENST00000533778 GDI1P31150 447 aa20.8■□□□□ 0.92
CHEK1-215ENST00000533778 CDH5P33151 784 aaPredicted RBP20.8■□□□□ 0.92
CHEK1-215ENST00000533778 DAOAP59103 153 aa20.8■□□□□ 0.92
CHEK1-215ENST00000533778 ARID5AQ03989 594 aa20.8■□□□□ 0.92
CHEK1-215ENST00000533778 GOLGA8FQ08AF8 430 aa20.8■□□□□ 0.92
CHEK1-215ENST00000533778 GOLGA8DPQ0D2H9 430 aa20.8■□□□□ 0.92
CHEK1-215ENST00000533778 TRIM72Q6ZMU5 477 aa20.8■□□□□ 0.92
CHEK1-215ENST00000533778 RSRC2Q7L4I2 434 aaKnown RBP20.8■□□□□ 0.92
CHEK1-215ENST00000533778 WDTC1Q8N5D0 677 aa20.8■□□□□ 0.92
CHEK1-215ENST00000533778 SH3RF2Q8TEC5 729 aa20.8■□□□□ 0.92
CHEK1-215ENST00000533778 IPO4Q8TEX9 1081 aaKnown RBP20.8■□□□□ 0.92
CHEK1-215ENST00000533778 RSPRY1Q96DX4 576 aa20.8■□□□□ 0.92
CHEK1-215ENST00000533778 MIS12Q9H081 205 aa20.8■□□□□ 0.92
CHEK1-215ENST00000533778 SYNCQ9H7C4 482 aa20.8■□□□□ 0.92
CHEK1-215ENST00000533778 TRPV5Q9NQA5 729 aa20.8■□□□□ 0.92
CHEK1-215ENST00000533778 ABCC13Q9NSE7 274 aa20.8■□□□□ 0.92
CHEK1-215ENST00000533778 OLA1Q9NTK5 396 aaKnown RBP20.8■□□□□ 0.92
CHEK1-215ENST00000533778 OSER1Q9NX31 292 aa20.8■□□□□ 0.92
CHEK1-215ENST00000533778 DNMT3LQ9UJW3 386 aa20.8■□□□□ 0.92
CHEK1-215ENST00000533778 NOCTQ9UK39 431 aaKnown RBP20.8■□□□□ 0.92
CHEK1-215ENST00000533778 FBXL21Q9UKT6 434 aa20.8■□□□□ 0.92
CHEK1-215ENST00000533778 ITIH6Q6UXX5 1313 aa20.79■□□□□ 0.92
CHEK1-215ENST00000533778 PIK3R2O00459 728 aa20.79■□□□□ 0.92
CHEK1-215ENST00000533778 GABBR2O75899 941 aa20.79■□□□□ 0.92
CHEK1-215ENST00000533778 MMEP08473 750 aa20.79■□□□□ 0.92
CHEK1-215ENST00000533778 PGFP49763 221 aa20.79■□□□□ 0.92
CHEK1-215ENST00000533778 C10orf120Q5SQS8 335 aa20.79■□□□□ 0.92
CHEK1-215ENST00000533778 SFMBT2Q5VUG0 894 aa20.79■□□□□ 0.92
CHEK1-215ENST00000533778 BSPRYQ5W0U4 402 aa20.79■□□□□ 0.92
CHEK1-215ENST00000533778 TRIM67Q6ZTA4 783 aa20.79■□□□□ 0.92
CHEK1-215ENST00000533778 SCUBE3Q8IX30 993 aa20.79■□□□□ 0.92
CHEK1-215ENST00000533778 C1orf131Q8NDD1 294 aaKnown RBP20.79■□□□□ 0.92
CHEK1-215ENST00000533778 RNF139Q8WU17 664 aa20.79■□□□□ 0.92
CHEK1-215ENST00000533778 DNASE1L2Q92874 299 aa20.79■□□□□ 0.92
CHEK1-215ENST00000533778 TTYH3Q9C0H2 523 aa20.79■□□□□ 0.92
CHEK1-215ENST00000533778 CYTH4Q9UIA0 394 aa20.79■□□□□ 0.92
CHEK1-215ENST00000533778 VCANP13611 3396 aa20.79■□□□□ 0.92
CHEK1-215ENST00000533778 DOCK8Q8NF50 2099 aa20.78■□□□□ 0.92
CHEK1-215ENST00000533778 LRRC53A6NM62 1247 aa20.78■□□□□ 0.92
CHEK1-215ENST00000533778 YJEFN3A6XGL0 299 aa20.78■□□□□ 0.92
CHEK1-215ENST00000533778 E5RJQ4 531 aa20.78■□□□□ 0.92
CHEK1-215ENST00000533778 E7ENQ6 273 aa20.78■□□□□ 0.92
CHEK1-215ENST00000533778 LEFTY2O00292 366 aa20.78■□□□□ 0.92
CHEK1-215ENST00000533778 USP4Q13107 963 aa20.78■□□□□ 0.92
CHEK1-215ENST00000533778 MTF1Q14872 753 aa20.78■□□□□ 0.92
CHEK1-215ENST00000533778 PDGFRLQ15198 375 aa20.78■□□□□ 0.92
CHEK1-215ENST00000533778 ZNF77Q15935 545 aa20.78■□□□□ 0.92
CHEK1-215ENST00000533778 ASIC2Q16515 512 aa20.78■□□□□ 0.92
CHEK1-215ENST00000533778 SARM1Q6SZW1 724 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms