RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 ZBED1O96006 694 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 LCP1P13796 627 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 GLULP15104 373 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 TCF3P15923 654 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 AOC1P19801 751 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 CD72P21854 359 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 ATP5C1P36542 298 aaKnown RBP18.39■□□□□ 0.53
NXF1-217ENST00000533671 PLA2G4AP47712 749 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 RGS7P49802 495 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 TPM4P67936 248 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 TNK2Q07912 1038 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 GOLGA8FQ08AF8 430 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 GOLGA8DPQ0D2H9 430 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 ADIGQ0VDE8 80 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 RUNX3Q13761 415 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 NCAPHQ15003 741 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 ITPRIPL2Q3MIP1 535 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 RAB41Q5JT25 222 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 C10orf120Q5SQS8 335 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 KLHDC7AQ5VTJ3 777 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 TRIM68Q6AZZ1 485 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 RSRC2Q7L4I2 434 aaKnown RBP18.39■□□□□ 0.53
NXF1-217ENST00000533671 OSCP1Q8WVF1 389 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 ZNF606Q8WXB4 792 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 FAM3CQ92520 227 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 MSANTD3Q96H12 275 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 CDK5RAP1Q96SZ6 601 aaKnown RBP18.39■□□□□ 0.53
NXF1-217ENST00000533671 NELL2Q99435 816 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 ULBP1Q9BZM6 244 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 ST7Q9NRC1 585 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 CFAP97Q9P2B7 532 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 NDRG2Q9UN36 371 aaKnown RBP18.39■□□□□ 0.53
NXF1-217ENST00000533671 SH3BP1Q9Y3L3 701 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 WNT6Q9Y6F9 365 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 COL4A2P08572 1712 aa18.39■□□□□ 0.53
NXF1-217ENST00000533671 ZDBF2Q9HCK1 2354 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 FAM170BA6NMN3 283 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 ARNTLO00327 626 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 IRF1P10914 325 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 BPIFB4P59827 614 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 YWHAGP61981 247 aaKnown RBP eCLIP18.38■□□□□ 0.53
NXF1-217ENST00000533671 UBXN1Q04323 297 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 NR1H3Q13133 447 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 DRAP1Q14919 205 aaPredicted RBP18.38■□□□□ 0.53
NXF1-217ENST00000533671 PKDCCQ504Y2 493 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 C1orf228Q6PIY5 440 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 CPA6Q8N4T0 437 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 TMEM105Q8N8V8 129 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 RIN3Q8TB24 985 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 KCTD13Q8WZ19 329 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 ATP2A3Q93084 1043 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 FAM83CQ9BQN1 747 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 ZSWIM1Q9BR11 485 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 FUCA2Q9BTY2 467 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 NMUR1Q9HB89 426 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 LTB4R2Q9NPC1 389 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 CYLDQ9NQC7 956 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 AJAP1Q9UKB5 411 aaPredicted RBP18.38■□□□□ 0.53
NXF1-217ENST00000533671 FHOD1Q9Y613 1164 aa18.38■□□□□ 0.53
NXF1-217ENST00000533671 LGALS16A8MUM7 142 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 FOXN3O00409 490 aaPredicted RBP18.37■□□□□ 0.53
NXF1-217ENST00000533671 PIK3R2O00459 728 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 SLC9A3R1O14745 358 aaPredicted RBP18.37■□□□□ 0.53
NXF1-217ENST00000533671 PI15O43692 258 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 DCNP07585 359 aaKnown RBP18.37■□□□□ 0.53
NXF1-217ENST00000533671 ARSAP15289 507 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 UCHL3P15374 230 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 ZNF18P17022 549 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 KRT9P35527 623 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 SOX9P48436 509 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 PGFP49763 221 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 AMPD2Q01433 879 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 FILIP1LQ4L180 1135 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 BTBD8Q5XKL5 378 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 SMYD5Q6GMV2 418 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 PMF1Q6P1K2 205 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 DHX40Q8IX18 779 aaKnown RBP18.37■□□□□ 0.53
NXF1-217ENST00000533671 PJA1Q8NG27 643 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 SLC35F5Q8WV83 523 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 GOLGA1Q92805 767 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 HSFY1Q96LI6 401 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 PRRX2Q99811 253 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 PDCL3Q9H2J4 239 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 ACP6Q9NPH0 428 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 PLCB1Q9NQ66 1216 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 CNGB3Q9NQW8 809 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 FAM207AQ9NSI2 230 aaPredicted RBP18.37■□□□□ 0.53
NXF1-217ENST00000533671 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.37■□□□□ 0.53
NXF1-217ENST00000533671 OSER1Q9NX31 292 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 CLIC5Q9NZA1 410 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 DNMT3LQ9UJW3 386 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 NUDT5Q9UKK9 219 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 COL4A3Q01955 1670 aa18.37■□□□□ 0.53
NXF1-217ENST00000533671 SPECC1L-ADORA2AF8WAN1 911 aa18.36■□□□□ 0.53
NXF1-217ENST00000533671 NFATC1O95644 943 aa18.36■□□□□ 0.53
NXF1-217ENST00000533671 TBX18O95935 607 aa18.36■□□□□ 0.53
NXF1-217ENST00000533671 PNMA6AP0CW24 399 aaPredicted RBP18.36■□□□□ 0.53
NXF1-217ENST00000533671 ATP1A3P13637 1013 aa18.36■□□□□ 0.53
NXF1-217ENST00000533671 ACADSBP45954 432 aa18.36■□□□□ 0.53
NXF1-217ENST00000533671 MLLT6P55198 1093 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms