RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 PLEKHM3Q6ZWE6 761 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 LRRC71Q8N4P6 559 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 DDHD1Q8NEL9 900 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 ATG4CQ96DT6 458 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 HES6Q96HZ4 224 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 LACRTQ9GZZ8 138 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 CTNNAL1Q9UBT7 734 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 PPRC1Q5VV67 1664 aaKnown RBP7.23□□□□□ -1.25
CTNND1-236ENST00000533667 ADGRA2Q96PE1 1338 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 SALL3Q9BXA9 1300 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 SALL1Q9NSC2 1324 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 SRRM3A6NNA2 597 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-236ENST00000533667 RASSF9O75901 435 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 SUPT7LO94864 414 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 IFNA14P01570 189 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 TCN1P20061 433 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-236ENST00000533667 FGFR2P21802 821 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 CAP2P40123 477 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 MGAT5Q09328 741 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 PRMT9Q6P2P2 845 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 NIPA1Q7RTP0 329 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 DDX53Q86TM3 631 aaKnown RBP7.23□□□□□ -1.25
CTNND1-236ENST00000533667 MARCH10Q8NA82 808 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-236ENST00000533667 TUBGCP3Q96CW5 907 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 VPS50Q96JG6 964 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 SEPT5Q99719 369 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-236ENST00000533667 CAAP1Q9H8G2 361 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 ANKZF1Q9H8Y5 726 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 ZFYVE28Q9HCC9 887 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 KRCC1Q9NPI7 259 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-236ENST00000533667 VTI1BQ9UEU0 232 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 WDR37Q9Y2I8 494 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 ACOT9Q9Y305 439 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 DIP2AQ14689 1571 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 PRR23D1E9PI22 279 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-236ENST00000533667 CSPG5O95196 566 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 PRR23D2P0DMB1 279 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-236ENST00000533667 PYGMP11217 842 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 CPA2P48052 419 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 PPP3CCP48454 512 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 NCKAP1LP55160 1127 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 MGAT5BQ3V5L5 792 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 CCDC153Q494R4 210 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 CCDC60Q8IWA6 550 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-236ENST00000533667 ABRAQ8N0Z2 381 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 COLEC11Q9BWP8 271 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 KLHL4Q9C0H6 718 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 AVENQ9NQS1 362 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-236ENST00000533667 HAO1Q9UJM8 370 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 RNF112Q9ULX5 631 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 USP18Q9UMW8 372 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 ZMYM2Q9UBW7 1377 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-236ENST00000533667 PRRG1O14668 218 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 XPO1O14980 1071 aaKnown RBP7.23□□□□□ -1.25
CTNND1-236ENST00000533667 DGKIO75912 1065 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 HMBSP08397 361 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 HOXC6P09630 235 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 RRM1P23921 792 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 CHRNA5P30532 468 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 ALDH1A3P47895 512 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 PSEN1P49768 467 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 KPNA1P52294 538 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-236ENST00000533667 ZNF135P52742 658 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-236ENST00000533667 GCNT1Q02742 428 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 CNTN1Q12860 1018 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 ZNF177Q13360 481 aaPredicted RBP7.23□□□□□ -1.25
CTNND1-236ENST00000533667 ACAP1Q15027 740 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 RASA2Q15283 850 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 C10orf120Q5SQS8 335 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 TUBA3EQ6PEY2 450 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 DENND5BQ6ZUT9 1274 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.23□□□□□ -1.25
CTNND1-236ENST00000533667 TMPRSS6Q8IU80 811 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 RAET1EQ8TD07 263 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 FAM172AQ8WUF8 416 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 SPIRE2Q8WWL2 714 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 INPP5DQ92835 1189 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 PGM2Q96G03 612 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 TMEM120AQ9BXJ8 343 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 TBC1D13Q9NVG8 400 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 IMPAD1Q9NX62 359 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 MCM8Q9UJA3 840 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 TMX2Q9Y320 296 aa7.23□□□□□ -1.25
CTNND1-236ENST00000533667 C17orf102A2RUQ5 167 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 SYNDIG1LA6NDD5 238 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 TBKBP1A7MCY6 615 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 ZBTB39O15060 712 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 LSM1O15116 133 aaKnown RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 GPR182O15218 404 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 AKAP3O75969 853 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 CRTAMO95727 393 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 CPA3P15088 417 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 LHX1P48742 406 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 OLR1P78380 273 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 OVGP1Q12889 678 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 TBX2Q13207 712 aaPredicted RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 ZNF268Q14587 947 aaPredicted RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 ADCK2Q7Z695 626 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 DIS3LQ8TF46 1054 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms