RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 APC2O95996 2303 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 LNP1A1A4G5 178 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 C2orf78A6NCI8 922 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 GABRDO14764 452 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 GIPC1O14908 333 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 MAPK13O15264 365 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 SLC16A3O15427 465 aaKnown RBP9.25□□□□□ -0.93
COPB1-210ENST00000533533 STX10O60499 249 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 HLA-DRAP01903 254 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 C4BPAP04003 597 aaKnown RBP9.25□□□□□ -0.93
COPB1-210ENST00000533533 PROS1P07225 676 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 PDGFRBP09619 1106 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 TCF3P15923 654 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 HDCP19113 662 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 PCSK1P29120 753 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 ATICP31939 592 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 MAGEA11P43364 429 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 LHX1P48742 406 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 CCDC142Q17RM4 750 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 USP39Q53GS9 565 aaKnown RBP9.25□□□□□ -0.93
COPB1-210ENST00000533533 ZNF667Q5HYK9 610 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 PMS2CLQ68D20 193 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 SASS6Q6UVJ0 657 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 SV2AQ7L0J3 742 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 C11orf74Q86VG3 221 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 OSTM1Q86WC4 334 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 SPATA2LQ8IUW3 424 aaPredicted RBP9.25□□□□□ -0.93
COPB1-210ENST00000533533 SCN4BQ8IWT1 228 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 TOP6BLQ8N6T0 577 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 ARL14EPQ8N8R7 260 aaPredicted RBP9.25□□□□□ -0.93
COPB1-210ENST00000533533 MLKLQ8NB16 471 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 OR6B3Q8NGW1 331 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 USP33Q8TEY7 942 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 TMEM174Q8WUU8 243 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 FUBP3Q96I24 572 aaKnown RBP eCLIP9.25□□□□□ -0.93
COPB1-210ENST00000533533 SRRTQ9BXP5 876 aaKnown RBP9.25□□□□□ -0.93
COPB1-210ENST00000533533 DACH1Q9UI36 760 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 ARHGAP26Q9UNA1 814 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 INVSQ9Y283 1065 aa9.25□□□□□ -0.93
COPB1-210ENST00000533533 TNRC6BQ9UPQ9 1833 aaKnown RBP9.25□□□□□ -0.93
COPB1-210ENST00000533533 GOLGA4Q13439 2230 aaKnown RBP9.25□□□□□ -0.93
COPB1-210ENST00000533533 MYH10P35580 1976 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 KNTC1P50748 2209 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 ASXL3Q9C0F0 2248 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 K7EQS6 105 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 IKBKBO14920 756 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 KHNYNO15037 678 aaKnown RBP9.24□□□□□ -0.93
COPB1-210ENST00000533533 HCRTO43612 131 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 VNN1O95497 513 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 NFATC1O95644 943 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 FGFR1OPO95684 399 aaKnown RBP9.24□□□□□ -0.93
COPB1-210ENST00000533533 P4HA1P13674 534 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 OPRD1P41143 372 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 MXI1P50539 228 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 PDE6CP51160 858 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 ZXDBP98169 803 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 PPP3CAQ08209 521 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 ZNF252P-AS1Q0IIN9 211 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 SOWAHAQ2M3V2 549 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 SGSM1Q2NKQ1 1148 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 DPCR1Q3MIW9 517 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 ZACNQ401N2 412 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 C2orf27AQ580R0 203 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 C1orf220Q5T0J3 134 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 CCDC183Q5T5S1 534 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 SH3PXD2AQ5TCZ1 1133 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 KRT39Q6A163 491 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 SPOPLQ6IQ16 392 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 ANO7Q6IWH7 933 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 TTI2Q6NXR4 508 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 FAM171BQ6P995 826 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 UNQ6494/PRO21346Q6UXR6 183 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 FILIP1Q7Z7B0 1213 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 RASSF3Q86WH2 238 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 SPATA17Q96L03 361 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 CNOT6LQ96LI5 555 aaKnown RBP9.24□□□□□ -0.93
COPB1-210ENST00000533533 CEP63Q96MT8 703 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 DUSP9Q99956 384 aaKnown RBP9.24□□□□□ -0.93
COPB1-210ENST00000533533 MRPL45Q9BRJ2 306 aaKnown RBP9.24□□□□□ -0.93
COPB1-210ENST00000533533 TPSD1Q9BZJ3 242 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 METTL14Q9HCE5 456 aaKnown RBP9.24□□□□□ -0.93
COPB1-210ENST00000533533 TMEM8AQ9HCN3 771 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 TMEM9BQ9NQ34 198 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 SCUBE2Q9NQ36 999 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 RWDD2AQ9UIY3 292 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 RALYQ9UKM9 306 aaKnown RBP9.24□□□□□ -0.93
COPB1-210ENST00000533533 ADAMTS9Q9P2N4 1935 aa9.24□□□□□ -0.93
COPB1-210ENST00000533533 FREM2Q5SZK8 3169 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 A8MXQ7 604 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 C1QTNF9BB2RNN3 333 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 CDX4O14627 284 aaPredicted RBP9.23□□□□□ -0.93
COPB1-210ENST00000533533 ATP2C2O75185 946 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 C1QTNF9P0C862 333 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 CEACAM1P13688 526 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 PFKLP17858 780 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 CSRP1P21291 193 aaKnown RBP9.23□□□□□ -0.93
COPB1-210ENST00000533533 BCKDHBP21953 392 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 GTF2H1P32780 548 aa9.23□□□□□ -0.93
COPB1-210ENST00000533533 GNL1P36915 607 aaPredicted RBP9.23□□□□□ -0.93
COPB1-210ENST00000533533 CDH8P55286 799 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms