RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 SCG3Q8WXD2 468 aaKnown RBP12.67□□□□□ -0.38
BDNF-218ENST00000533246 LZICQ8WZA0 190 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 MTBPQ96DY7 904 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 ASCC2Q9H1I8 757 aaPredicted RBP12.67□□□□□ -0.38
BDNF-218ENST00000533246 ITGB1BP2Q9UKP3 347 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 KNL1Q8NG31 2342 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 KNDC1Q76NI1 1749 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 RNF103-CHMP3A0A140T963 221 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 TRIM64CA6NLI5 447 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 FOXO6A8MYZ6 492 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 SNHG28P0DPA3 235 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 GFAPP14136 432 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 ABCG1P45844 678 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 TAF6P49848 677 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 ALDH5A1P51649 535 aaPredicted RBP12.67□□□□□ -0.38
BDNF-218ENST00000533246 MAP3K7CLP57077 242 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 STILQ15468 1287 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 TATDN1Q6P1N9 297 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 TAS2R42Q7RTR8 314 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 MTDHQ86UE4 582 aaKnown RBP12.67□□□□□ -0.38
BDNF-218ENST00000533246 SDCCAG3Q96C92 435 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 BORCS6Q96GS4 357 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 CNPY3Q9BT09 278 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 TRPV6Q9H1D0 765 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 CYP39A1Q9NYL5 469 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 NUDT5Q9UKK9 219 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 C3P01024 1663 aa12.67□□□□□ -0.38
BDNF-218ENST00000533246 ASTN2O75129 1339 aaPredicted RBP12.67□□□□□ -0.38
BDNF-218ENST00000533246 TCRBV7S2A1N4TA0A589 114 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 LACTBL1A8MY62 500 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 TADA2AO75478 443 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 BANF1O75531 89 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 JCHAINP01591 159 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 VDRP11473 427 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 TMEM132BQ14DG7 1078 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 WLSQ5T9L3 541 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 MRPL46Q9H2W6 279 aaKnown RBP12.66□□□□□ -0.38
BDNF-218ENST00000533246 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.66□□□□□ -0.38
BDNF-218ENST00000533246 UBR1Q8IWV7 1749 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 YDJCA8MPS7 323 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 GOLGA8TH3BQL2 631 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 CCNE2O96020 404 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 CD4P01730 458 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 TPH1P17752 444 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 MIPP30301 263 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 AARSP49588 968 aaKnown RBP eCLIP12.66□□□□□ -0.38
BDNF-218ENST00000533246 ADARP55265 1226 aaKnown RBP12.66□□□□□ -0.38
BDNF-218ENST00000533246 USP46P62068 366 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 DLK2Q6UY11 383 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 WDR49Q8IV35 697 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 TRIML2Q8N7C3 387 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 AGAP11Q8TF27 550 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 CELF6Q96J87 481 aaKnown RBP12.66□□□□□ -0.38
BDNF-218ENST00000533246 PCDHB18PQ96TA0 734 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 SEPT5Q99719 369 aaPredicted RBP12.66□□□□□ -0.38
BDNF-218ENST00000533246 UPF3AQ9H1J1 476 aaKnown RBP12.66□□□□□ -0.38
BDNF-218ENST00000533246 ERVK-5Q9HDB9 667 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 NINJ2Q9NZG7 142 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 TJP2Q9UDY2 1190 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 B4GALT5O43286 388 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 ENDOD1O94919 500 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 AVPR1AP37288 418 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 ADCYAP1R1P41586 468 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 GTF2BQ00403 316 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 HIC1Q14526 733 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 PDK1Q15118 436 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 MGAT5BQ3V5L5 792 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 ANGPTL8Q6UXH0 198 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 PRPF39Q86UA1 669 aaKnown RBP12.66□□□□□ -0.38
BDNF-218ENST00000533246 DNAJB3Q8WWF6 145 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 SHC3Q92529 594 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 KREMEN1Q96MU8 473 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 FOXP3Q9BZS1 431 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 SUN2Q9UH99 717 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 WDR37Q9Y2I8 494 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 RGPD8O14715 1765 aaPredicted RBP12.66□□□□□ -0.38
BDNF-218ENST00000533246 CASTOR2A6NHX0 329 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 C2CD2LO14523 706 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 TSPAN9O75954 239 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 POLBP06746 335 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 ZNF24P17028 368 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 BGNP21810 368 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 VCPP55072 806 aaKnown RBP12.66□□□□□ -0.38
BDNF-218ENST00000533246 VGLL4Q14135 290 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 TDRD10Q5VZ19 366 aaKnown RBP12.66□□□□□ -0.38
BDNF-218ENST00000533246 DENND1BQ6P3S1 775 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 DNAJC14Q6Y2X3 702 aaPredicted RBP12.66□□□□□ -0.38
BDNF-218ENST00000533246 KIAA2013Q8IYS2 634 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 FAM71AQ8IYT1 594 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 ATPAF2Q8N5M1 289 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.66□□□□□ -0.38
BDNF-218ENST00000533246 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.66□□□□□ -0.38
BDNF-218ENST00000533246 NMD3Q96D46 503 aaKnown RBP12.66□□□□□ -0.38
BDNF-218ENST00000533246 COL20A1Q9P218 1284 aa12.66□□□□□ -0.38
BDNF-218ENST00000533246 E5RJQ4 531 aa12.65□□□□□ -0.38
BDNF-218ENST00000533246 KDM1AO60341 852 aa12.65□□□□□ -0.38
BDNF-218ENST00000533246 TSPAN3O60637 253 aa12.65□□□□□ -0.38
BDNF-218ENST00000533246 CHEK2O96017 543 aa12.65□□□□□ -0.38
BDNF-218ENST00000533246 AMPD1P23109 780 aa12.65□□□□□ -0.38
BDNF-218ENST00000533246 MTTPP55157 894 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms