RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 PSEN1P49768 467 aa21.53■■□□□ 1.04
CCS-208ENST00000533244 PDGFRLQ15198 375 aa21.53■■□□□ 1.04
CCS-208ENST00000533244 ZNF852Q6ZMS4 543 aa21.53■■□□□ 1.04
CCS-208ENST00000533244 BHLHA9Q7RTU4 235 aa21.53■■□□□ 1.04
CCS-208ENST00000533244 APTXQ7Z2E3 356 aaKnown RBP21.53■■□□□ 1.04
CCS-208ENST00000533244 OSCP1Q8WVF1 389 aa21.53■■□□□ 1.04
CCS-208ENST00000533244 VPS16Q9H269 839 aa21.53■■□□□ 1.04
CCS-208ENST00000533244 C8orf33Q9H7E9 229 aaPredicted RBP21.53■■□□□ 1.04
CCS-208ENST00000533244 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.53■■□□□ 1.04
CCS-208ENST00000533244 CLIC5Q9NZA1 410 aa21.53■■□□□ 1.04
CCS-208ENST00000533244 RAPGEFL1Q9UHV5 662 aa21.53■■□□□ 1.04
CCS-208ENST00000533244 A0A1W2PQH9 124 aa21.52■■□□□ 1.04
CCS-208ENST00000533244 MAN2B1O00754 1011 aa21.52■■□□□ 1.04
CCS-208ENST00000533244 CD72P21854 359 aa21.52■■□□□ 1.04
CCS-208ENST00000533244 TKTL1P51854 596 aa21.52■■□□□ 1.04
CCS-208ENST00000533244 COPB1P53618 953 aaKnown RBP21.52■■□□□ 1.04
CCS-208ENST00000533244 KLHDC7AQ5VTJ3 777 aa21.52■■□□□ 1.04
CCS-208ENST00000533244 TRIM68Q6AZZ1 485 aa21.52■■□□□ 1.04
CCS-208ENST00000533244 CC2D1AQ6P1N0 951 aaPredicted RBP21.52■■□□□ 1.04
CCS-208ENST00000533244 KLHDC10Q6PID8 442 aa21.52■■□□□ 1.04
CCS-208ENST00000533244 DDX42Q86XP3 938 aaKnown RBP eCLIP21.52■■□□□ 1.04
CCS-208ENST00000533244 CCDC105Q8IYK2 499 aa21.52■■□□□ 1.04
CCS-208ENST00000533244 SCML4Q8N228 414 aa21.52■■□□□ 1.04
CCS-208ENST00000533244 SECISBP2LQ93073 1101 aaKnown RBP21.52■■□□□ 1.04
CCS-208ENST00000533244 NAA15Q9BXJ9 866 aaKnown RBP21.52■■□□□ 1.04
CCS-208ENST00000533244 SMPD4Q9NXE4 827 aa21.52■■□□□ 1.04
CCS-208ENST00000533244 SIT1Q9Y3P8 196 aa21.52■■□□□ 1.04
CCS-208ENST00000533244 ARIH1Q9Y4X5 557 aaPredicted RBP21.52■■□□□ 1.04
CCS-208ENST00000533244 MIA3Q5JRA6 1907 aa21.51■■□□□ 1.03
CCS-208ENST00000533244 M0QYV0 167 aa21.51■■□□□ 1.03
CCS-208ENST00000533244 STK25O00506 426 aa21.51■■□□□ 1.03
CCS-208ENST00000533244 PES1O00541 588 aaKnown RBP21.51■■□□□ 1.03
CCS-208ENST00000533244 GABBR2O75899 941 aa21.51■■□□□ 1.03
CCS-208ENST00000533244 RFX1P22670 979 aa21.51■■□□□ 1.03
CCS-208ENST00000533244 TARSP26639 723 aaKnown RBP21.51■■□□□ 1.03
CCS-208ENST00000533244 GNA15P30679 374 aa21.51■■□□□ 1.03
CCS-208ENST00000533244 RUNX3Q13761 415 aa21.51■■□□□ 1.03
CCS-208ENST00000533244 EML3Q32P44 896 aa21.51■■□□□ 1.03
CCS-208ENST00000533244 ITPRIPL2Q3MIP1 535 aa21.51■■□□□ 1.03
CCS-208ENST00000533244 C1orf228Q6PIY5 440 aa21.51■■□□□ 1.03
CCS-208ENST00000533244 DHX40Q8IX18 779 aaKnown RBP21.51■■□□□ 1.03
CCS-208ENST00000533244 ZNF606Q8WXB4 792 aa21.51■■□□□ 1.03
CCS-208ENST00000533244 NELL2Q99435 816 aa21.51■■□□□ 1.03
CCS-208ENST00000533244 ULBP1Q9BZM6 244 aa21.51■■□□□ 1.03
CCS-208ENST00000533244 EBF3Q9H4W6 596 aa21.51■■□□□ 1.03
CCS-208ENST00000533244 ACP6Q9NPH0 428 aa21.51■■□□□ 1.03
CCS-208ENST00000533244 PLCB1Q9NQ66 1216 aa21.51■■□□□ 1.03
CCS-208ENST00000533244 MTF2Q9Y483 593 aaPredicted RBP21.51■■□□□ 1.03
CCS-208ENST00000533244 WNT6Q9Y6F9 365 aa21.51■■□□□ 1.03
CCS-208ENST00000533244 WDFY4Q6ZS81 3184 aa21.5■■□□□ 1.03
CCS-208ENST00000533244 OTOL1A6NHN0 477 aaPredicted RBP21.5■■□□□ 1.03
CCS-208ENST00000533244 SPECC1L-ADORA2AF8WAN1 911 aa21.5■■□□□ 1.03
CCS-208ENST00000533244 ZBED1O96006 694 aa21.5■■□□□ 1.03
CCS-208ENST00000533244 TPM2P07951 284 aa21.5■■□□□ 1.03
CCS-208ENST00000533244 RARGP13631 454 aa21.5■■□□□ 1.03
CCS-208ENST00000533244 ARSAP15289 507 aa21.5■■□□□ 1.03
CCS-208ENST00000533244 CTHP32929 405 aa21.5■■□□□ 1.03
CCS-208ENST00000533244 GPD2P43304 727 aa21.5■■□□□ 1.03
CCS-208ENST00000533244 SOX9P48436 509 aa21.5■■□□□ 1.03
CCS-208ENST00000533244 RPL34P49207 117 aaKnown RBP21.5■■□□□ 1.03
CCS-208ENST00000533244 ADIGQ0VDE8 80 aa21.5■■□□□ 1.03
CCS-208ENST00000533244 PMF1Q6P1K2 205 aa21.5■■□□□ 1.03
CCS-208ENST00000533244 RALGPS2Q86X27 583 aaPredicted RBP21.5■■□□□ 1.03
CCS-208ENST00000533244 ARHGAP18Q8N392 663 aa21.5■■□□□ 1.03
CCS-208ENST00000533244 FAM3CQ92520 227 aa21.5■■□□□ 1.03
CCS-208ENST00000533244 CHFRQ96EP1 664 aa21.5■■□□□ 1.03
CCS-208ENST00000533244 LSM14BQ9BX40 385 aaKnown RBP21.5■■□□□ 1.03
CCS-208ENST00000533244 LRRC4Q9HBW1 653 aa21.5■■□□□ 1.03
CCS-208ENST00000533244 DUS2Q9NX74 493 aaKnown RBP21.5■■□□□ 1.03
CCS-208ENST00000533244 NAGPAQ9UK23 515 aa21.5■■□□□ 1.03
CCS-208ENST00000533244 MRPS17Q9Y2R5 130 aaKnown RBP21.5■■□□□ 1.03
CCS-208ENST00000533244 FHOD1Q9Y613 1164 aa21.5■■□□□ 1.03
CCS-208ENST00000533244 SYCE3A1L190 88 aa21.49■■□□□ 1.03
CCS-208ENST00000533244 LGALS16A8MUM7 142 aa21.49■■□□□ 1.03
CCS-208ENST00000533244 FOXN3O00409 490 aaPredicted RBP21.49■■□□□ 1.03
CCS-208ENST00000533244 MED7O43513 233 aa21.49■■□□□ 1.03
CCS-208ENST00000533244 TBX18O95935 607 aa21.49■■□□□ 1.03
CCS-208ENST00000533244 UCHL3P15374 230 aa21.49■■□□□ 1.03
CCS-208ENST00000533244 ATP5C1P36542 298 aaKnown RBP21.49■■□□□ 1.03
CCS-208ENST00000533244 IFNAR2P48551 515 aa21.49■■□□□ 1.03
CCS-208ENST00000533244 KPNA1P52294 538 aaPredicted RBP21.49■■□□□ 1.03
CCS-208ENST00000533244 FZD5Q13467 585 aa21.49■■□□□ 1.03
CCS-208ENST00000533244 UBXN2BQ14CS0 331 aa21.49■■□□□ 1.03
CCS-208ENST00000533244 TXNDC11Q6PKC3 985 aa21.49■■□□□ 1.03
CCS-208ENST00000533244 FAM71AQ8IYT1 594 aa21.49■■□□□ 1.03
CCS-208ENST00000533244 ANKRD20A12PQ8NF67 263 aa21.49■■□□□ 1.03
CCS-208ENST00000533244 CLDN23Q96B33 292 aa21.49■■□□□ 1.03
CCS-208ENST00000533244 HSFY1Q96LI6 401 aa21.49■■□□□ 1.03
CCS-208ENST00000533244 PRRX2Q99811 253 aa21.49■■□□□ 1.03
CCS-208ENST00000533244 GANQ9H2C0 597 aa21.49■■□□□ 1.03
CCS-208ENST00000533244 CNGB3Q9NQW8 809 aa21.49■■□□□ 1.03
CCS-208ENST00000533244 CFAP97Q9P2B7 532 aa21.49■■□□□ 1.03
CCS-208ENST00000533244 SIK3Q9Y2K2 1263 aa21.49■■□□□ 1.03
CCS-208ENST00000533244 E2F8A0AVK6 867 aa21.48■■□□□ 1.03
CCS-208ENST00000533244 FAM170BA6NMN3 283 aa21.48■■□□□ 1.03
CCS-208ENST00000533244 THAP12O43422 761 aa21.48■■□□□ 1.03
CCS-208ENST00000533244 DCNP07585 359 aaKnown RBP21.48■■□□□ 1.03
CCS-208ENST00000533244 ATP1A3P13637 1013 aa21.48■■□□□ 1.03
CCS-208ENST00000533244 CLCN1P35523 988 aa21.48■■□□□ 1.03
CCS-208ENST00000533244 ZNF165P49910 485 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms