RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 CCSER2Q9H7U1 834 aa17.56■□□□□ 0.4
PKP3-209ENST00000533069 CYLDQ9NQC7 956 aa17.56■□□□□ 0.4
PKP3-209ENST00000533069 RBM12Q9NTZ6 932 aaKnown RBP17.56■□□□□ 0.4
PKP3-209ENST00000533069 ZSCAN32Q9NX65 697 aa17.56■□□□□ 0.4
PKP3-209ENST00000533069 TBC1D14Q9P2M4 693 aa17.56■□□□□ 0.4
PKP3-209ENST00000533069 KIAA1257Q9ULG3 409 aa17.56■□□□□ 0.4
PKP3-209ENST00000533069 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.56■□□□□ 0.4
PKP3-209ENST00000533069 R4GN57 208 aa17.56■□□□□ 0.4
PKP3-209ENST00000533069 CYP26A1O43174 497 aa17.55■□□□□ 0.4
PKP3-209ENST00000533069 TLR5O60602 858 aa17.55■□□□□ 0.4
PKP3-209ENST00000533069 PAPSS2O95340 614 aaPredicted RBP17.55■□□□□ 0.4
PKP3-209ENST00000533069 CXCL12P48061 93 aa17.55■□□□□ 0.4
PKP3-209ENST00000533069 NRLP54845 237 aa17.55■□□□□ 0.4
PKP3-209ENST00000533069 KCNH2Q12809 1159 aa17.55■□□□□ 0.4
PKP3-209ENST00000533069 LRMPQ12912 555 aa17.55■□□□□ 0.4
PKP3-209ENST00000533069 GAS6Q14393 721 aa17.55■□□□□ 0.4
PKP3-209ENST00000533069 FBXO43Q4G163 708 aa17.55■□□□□ 0.4
PKP3-209ENST00000533069 SGO2Q562F6 1265 aa17.55■□□□□ 0.4
PKP3-209ENST00000533069 FSTL4Q6MZW2 842 aa17.55■□□□□ 0.4
PKP3-209ENST00000533069 ASCL5Q7RTU5 278 aa17.55■□□□□ 0.4
PKP3-209ENST00000533069 CCDC186Q7Z3E2 898 aa17.55■□□□□ 0.4
PKP3-209ENST00000533069 TADA2BQ86TJ2 420 aa17.55■□□□□ 0.4
PKP3-209ENST00000533069 ANKRD52Q8NB46 1076 aa17.55■□□□□ 0.4
PKP3-209ENST00000533069 ZBTB44Q8NCP5 570 aa17.55■□□□□ 0.4
PKP3-209ENST00000533069 ATRIPQ8WXE1 791 aa17.55■□□□□ 0.4
PKP3-209ENST00000533069 OTUB2Q96DC9 234 aa17.55■□□□□ 0.4
PKP3-209ENST00000533069 ZFRQ96KR1 1074 aaKnown RBP17.55■□□□□ 0.4
PKP3-209ENST00000533069 LINC00597Q9H2U6 94 aa17.55■□□□□ 0.4
PKP3-209ENST00000533069 USP3Q9Y6I4 520 aa17.55■□□□□ 0.4
PKP3-209ENST00000533069 F5P12259 2224 aa17.55■□□□□ 0.4
PKP3-209ENST00000533069 ZFHX2Q9C0A1 2572 aaPredicted RBP17.54■□□□□ 0.4
PKP3-209ENST00000533069 PATJQ8NI35 1801 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 SMTNL1A8MU46 457 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 LMNAP02545 664 aaKnown RBP17.54■□□□□ 0.4
PKP3-209ENST00000533069 PAEPP09466 180 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 TDGF1P13385 188 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 CD19P15391 556 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 ZNF165P49910 485 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 BCAT1P54687 386 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 GCNT1Q02742 428 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 GOLGA8FQ08AF8 430 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 GOLGA8DPQ0D2H9 430 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 DPCR1Q3MIW9 517 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 ANO6Q4KMQ2 910 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 KLHDC10Q6PID8 442 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 Q6ZS52 159 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 PPM1KQ8N3J5 372 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 ZNF276Q8N554 614 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 CCDC26Q8TAB7 109 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 LMO3Q8TAP4 145 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 CD101Q93033 1021 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 CDK5RAP1Q96SZ6 601 aaKnown RBP17.54■□□□□ 0.4
PKP3-209ENST00000533069 HESX1Q9UBX0 185 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 SH3BP1Q9Y3L3 701 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 MYO15AQ9UKN7 3530 aa17.54■□□□□ 0.4
PKP3-209ENST00000533069 ATG13O75143 517 aa17.53■□□□□ 0.4
PKP3-209ENST00000533069 ADH1CP00326 375 aa17.53■□□□□ 0.4
PKP3-209ENST00000533069 CYP17A1P05093 508 aa17.53■□□□□ 0.4
PKP3-209ENST00000533069 VDRP11473 427 aa17.53■□□□□ 0.4
PKP3-209ENST00000533069 ATP5C1P36542 298 aaKnown RBP17.53■□□□□ 0.4
PKP3-209ENST00000533069 GALK1P51570 392 aa17.53■□□□□ 0.4
PKP3-209ENST00000533069 TPM4P67936 248 aa17.53■□□□□ 0.4
PKP3-209ENST00000533069 SATB1Q01826 763 aa17.53■□□□□ 0.4
PKP3-209ENST00000533069 GOLGA7BQ2TAP0 167 aa17.53■□□□□ 0.4
PKP3-209ENST00000533069 TSSK4Q6SA08 328 aa17.53■□□□□ 0.4
PKP3-209ENST00000533069 PIGZQ86VD9 579 aa17.53■□□□□ 0.4
PKP3-209ENST00000533069 ADGRG2Q8IZP9 1017 aa17.53■□□□□ 0.4
PKP3-209ENST00000533069 ARHGAP18Q8N392 663 aa17.53■□□□□ 0.4
PKP3-209ENST00000533069 EHBP1Q8NDI1 1231 aa17.53■□□□□ 0.4
PKP3-209ENST00000533069 CNOT6LQ96LI5 555 aaKnown RBP17.53■□□□□ 0.4
PKP3-209ENST00000533069 NMUR1Q9HB89 426 aa17.53■□□□□ 0.4
PKP3-209ENST00000533069 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.53■□□□□ 0.4
PKP3-209ENST00000533069 CLIC5Q9NZA1 410 aa17.53■□□□□ 0.4
PKP3-209ENST00000533069 TSPAN16Q9UKR8 245 aa17.53■□□□□ 0.4
PKP3-209ENST00000533069 USP34Q70CQ2 3546 aa17.52■□□□□ 0.4
PKP3-209ENST00000533069 A0A1W2PQH9 124 aa17.52■□□□□ 0.4
PKP3-209ENST00000533069 XPO1O14980 1071 aaKnown RBP17.52■□□□□ 0.4
PKP3-209ENST00000533069 LILRB5O75023 590 aa17.52■□□□□ 0.4
PKP3-209ENST00000533069 SETSIPP0DME0 302 aa17.52■□□□□ 0.4
PKP3-209ENST00000533069 RALAP11233 206 aa17.52■□□□□ 0.4
PKP3-209ENST00000533069 RARGP13631 454 aa17.52■□□□□ 0.4
PKP3-209ENST00000533069 EIF2DP41214 584 aaKnown RBP17.52■□□□□ 0.4
PKP3-209ENST00000533069 PGFP49763 221 aa17.52■□□□□ 0.4
PKP3-209ENST00000533069 BST2Q10589 180 aaKnown RBP17.52■□□□□ 0.4
PKP3-209ENST00000533069 GSE1Q14687 1217 aa17.52■□□□□ 0.4
PKP3-209ENST00000533069 DHCR24Q15392 516 aa17.52■□□□□ 0.4
PKP3-209ENST00000533069 RAB41Q5JT25 222 aa17.52■□□□□ 0.4
PKP3-209ENST00000533069 TMEM270Q6UE05 265 aa17.52■□□□□ 0.4
PKP3-209ENST00000533069 TTC30AQ86WT1 665 aa17.52■□□□□ 0.4
PKP3-209ENST00000533069 DNMT3LQ9UJW3 386 aa17.52■□□□□ 0.4
PKP3-209ENST00000533069 NAGPAQ9UK23 515 aa17.52■□□□□ 0.4
PKP3-209ENST00000533069 PCDHB4Q9Y5E5 795 aa17.52■□□□□ 0.4
PKP3-209ENST00000533069 VPS13AQ96RL7 3174 aa17.51■□□□□ 0.39
PKP3-209ENST00000533069 ANAPC1Q9H1A4 1944 aa17.51■□□□□ 0.39
PKP3-209ENST00000533069 BECN2A8MW95 431 aa17.51■□□□□ 0.39
PKP3-209ENST00000533069 CHURC1-FNTBB4DL54 471 aa17.51■□□□□ 0.39
PKP3-209ENST00000533069 O00370 1275 aa17.51■□□□□ 0.39
PKP3-209ENST00000533069 EGFP01133 1207 aa17.51■□□□□ 0.39
PKP3-209ENST00000533069 HOXA6P31267 233 aa17.51■□□□□ 0.39
PKP3-209ENST00000533069 STILQ15468 1287 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms