RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 UAP1L1Q3KQV9 507 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 DCAF17Q5H9S7 520 aaPredicted RBP10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 SDHAF4Q5VUM1 108 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 SPOPLQ6IQ16 392 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 KIAA1211LQ6NV74 962 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 UNC93AQ86WB7 457 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 TRMT2BQ96GJ1 504 aaKnown RBP10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 SPATA17Q96L03 361 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 MYRFLQ96LU7 910 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 GBP4Q96PP9 640 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 UBL7Q96S82 380 aaPredicted RBP10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 DUSP9Q99956 384 aaKnown RBP10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 ELOVL4Q9GZR5 314 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 DPEP3Q9H4B8 488 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 CLSTN2Q9H4D0 955 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 CYP3A43Q9HB55 503 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 LMBRD1Q9NUN5 540 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 C2orf42Q9NWW7 574 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 RAB20Q9NX57 234 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 UXTQ9UBK9 157 aaPredicted RBP10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 ZMYM5Q9UJ78 669 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 MAGED2Q9UNF1 606 aaPredicted RBP10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 CTNND2Q9UQB3 1225 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 FREM2Q5SZK8 3169 aa10.81□□□□□ -0.68
CHMP4A-206ENST00000533011 TRIM66O15016 1216 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 F11P03951 625 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 TRIM21P19474 475 aaKnown RBP10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 ANXA13P27216 316 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 WEE1P30291 646 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 PXNP49023 591 aaPredicted RBP10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 NDST1P52848 882 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 CCDC40Q4G0X9 1142 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 FBXO43Q4G163 708 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 WDR44Q5JSH3 913 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 STXBP5Q5T5C0 1151 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 GPR158Q5T848 1215 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 TXNDC11Q6PKC3 985 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 PIP4P1Q86T03 277 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 CRYBG2Q8N1P7 616 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 CCDC26Q8TAB7 109 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 SLC35C1Q96A29 364 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 FAXDC2Q96IV6 333 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 C8orf48Q96LL4 319 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 BBC3Q96PG8 261 aaPredicted RBP10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 NUSAP1Q9BXS6 441 aaKnown RBP10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 B3GNT5Q9BYG0 378 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 DNAI2Q9GZS0 605 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 NIF3L1Q9GZT8 377 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 NUP62CLQ9H1M0 184 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 TASP1Q9H6P5 420 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 APOBEC3GQ9HC16 384 aaKnown RBP10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.8□□□□□ -0.682e-8■■■■■ 136
CHMP4A-206ENST00000533011 EHD2Q9NZN4 543 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 COQ4Q9Y3A0 265 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 COL4A2P08572 1712 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 ATP8B3O60423 1300 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 TICRRQ7Z2Z1 1910 aa10.8□□□□□ -0.68
CHMP4A-206ENST00000533011 GOLGA6L22H0YM25 854 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 DPYSL4O14531 572 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 FGFR1OPO95684 399 aaKnown RBP10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 GNA14O95837 355 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 DDX6P26196 483 aaKnown RBP eCLIP10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 STX17P56962 302 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 IRX4P78413 519 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 CYP4F8P98187 520 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 INCA1Q0VD86 236 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 SEMA3BQ13214 749 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 CBWD6Q4V339 395 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 USP39Q53GS9 565 aaKnown RBP10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 CBWD3Q5JTY5 395 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 CBWD5Q5RIA9 395 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 DENND5BQ6ZUT9 1274 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 RAB44Q7Z6P3 723 aaPredicted RBP10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 TMEM150AQ86TG1 271 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 ACOT1Q86TX2 421 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 ARID3BQ8IVW6 561 aaPredicted RBP10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 TTC39CQ8N584 583 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 MLKLQ8NB16 471 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 STKLD1Q8NE28 680 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 MRPS31Q92665 395 aaKnown RBP10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 SEMA4DQ92854 862 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 SLC46A2Q9BY10 475 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 ZNF518BQ9C0D4 1074 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 THG1LQ9NWX6 298 aaKnown RBP10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 DKK4Q9UBT3 224 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 RWDD2AQ9UIY3 292 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 PTPRDP23468 1912 aa10.79□□□□□ -0.68
CHMP4A-206ENST00000533011 ACACAQ13085 2346 aa10.78□□□□□ -0.68
CHMP4A-206ENST00000533011 F8VP50 259 aa10.78□□□□□ -0.68
CHMP4A-206ENST00000533011 CLDN5O00501 218 aa10.78□□□□□ -0.68
CHMP4A-206ENST00000533011 APBB3O95704 486 aa10.78□□□□□ -0.68
CHMP4A-206ENST00000533011 CD58P19256 250 aa10.78□□□□□ -0.68
CHMP4A-206ENST00000533011 GBP1P32455 592 aa10.78□□□□□ -0.68
CHMP4A-206ENST00000533011 AVPR1AP37288 418 aa10.78□□□□□ -0.68
CHMP4A-206ENST00000533011 SOX9P48436 509 aa10.78□□□□□ -0.68
CHMP4A-206ENST00000533011 FMO5P49326 533 aa10.78□□□□□ -0.68
CHMP4A-206ENST00000533011 MARSP56192 900 aaKnown RBP10.78□□□□□ -0.68
CHMP4A-206ENST00000533011 ITPRIPL2Q3MIP1 535 aa10.78□□□□□ -0.68
CHMP4A-206ENST00000533011 TMEM196Q5HYL7 178 aa10.78□□□□□ -0.68
CHMP4A-206ENST00000533011 PMS2CLQ68D20 193 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms