RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 C1orf131Q8NDD1 294 aaKnown RBP13.17□□□□□ -0.3
COPB1-208ENST00000532088 IPO4Q8TEX9 1081 aaKnown RBP13.17□□□□□ -0.3
COPB1-208ENST00000532088 OVCA2Q8WZ82 227 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 IRGQQ8WZA9 623 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 PABPC5Q96DU9 382 aaKnown RBP13.17□□□□□ -0.3
COPB1-208ENST00000532088 TRIM11Q96F44 468 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 KCNK16Q96T55 309 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 LRRC4Q9HBW1 653 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 AVENQ9NQS1 362 aaPredicted RBP13.17□□□□□ -0.3
COPB1-208ENST00000532088 CNGB3Q9NQW8 809 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 UXTQ9UBK9 157 aaPredicted RBP13.17□□□□□ -0.3
COPB1-208ENST00000532088 ADAMTS1Q9UHI8 967 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 NAGPAQ9UK23 515 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 STRIP2Q9ULQ0 834 aa13.17□□□□□ -0.3
COPB1-208ENST00000532088 A0A087X0T9 212 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 SLC38A8A6NNN8 435 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 EIF3CLB5ME19 914 aaKnown RBP13.16□□□□□ -0.3
COPB1-208ENST00000532088 ARHGAP6O43182 974 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 AKR1B10O60218 316 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 CALB1P05937 261 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 FAM228BP0C875 321 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 MYBL1P10243 752 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 PPP3CCP48454 512 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 EPHA5P54756 1037 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 PTPN20Q4JDL3 420 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 PM20D1Q6GTS8 502 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 ANKRD54Q6NXT1 300 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 PMF1Q6P1K2 205 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 ALKBH5Q6P6C2 394 aaKnown RBP13.16□□□□□ -0.3
COPB1-208ENST00000532088 ERICH1Q86X53 443 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 PASD1Q8IV76 773 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 VN1R2Q8NFZ6 395 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 PPP1R13BQ96KQ4 1090 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 FAM161BQ96MY7 647 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 GUCD1Q96NT3 240 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 EIF3CQ99613 913 aaKnown RBP13.16□□□□□ -0.3
COPB1-208ENST00000532088 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.16□□□□□ -0.3
COPB1-208ENST00000532088 LUC7LQ9NQ29 371 aaKnown RBP13.16□□□□□ -0.3
COPB1-208ENST00000532088 SEPT11Q9NVA2 429 aaKnown RBP13.16□□□□□ -0.3
COPB1-208ENST00000532088 WDR35Q9P2L0 1181 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 CYTH4Q9UIA0 394 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 INTUQ9ULD6 942 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 SCML2Q9UQR0 700 aa13.16□□□□□ -0.3
COPB1-208ENST00000532088 SOBPA7XYQ1 873 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 TULP2O00295 520 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 IPO7O95373 1038 aaKnown RBP13.15□□□□□ -0.3
COPB1-208ENST00000532088 PTMAP06454 111 aaKnown RBP13.15□□□□□ -0.3
COPB1-208ENST00000532088 SPATA31D3P0C874 917 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 FOSL2P15408 326 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 HMGA1P17096 107 aaKnown RBP13.15□□□□□ -0.3
COPB1-208ENST00000532088 YWHAQP27348 245 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 GPR15P49685 360 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 SKOR1P84550 965 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 ITIH3Q06033 890 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 ZNF268Q14587 947 aaPredicted RBP13.15□□□□□ -0.3
COPB1-208ENST00000532088 LINC01559Q495D7 138 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 SPATA31D4Q6ZUB0 917 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 MON1BQ7L1V2 547 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 BEND5Q7L4P6 421 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 DNAJB7Q7Z6W7 309 aaPredicted RBP13.15□□□□□ -0.3
COPB1-208ENST00000532088 SIX6OS1Q8N1H7 587 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 ARHGAP18Q8N392 663 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 PDZD8Q8NEN9 1154 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 MYLIPQ8WY64 445 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 C18orf8Q96DM3 657 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 ZNF512Q96ME7 567 aaPredicted RBP13.15□□□□□ -0.3
COPB1-208ENST00000532088 CPXM1Q96SM3 734 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 TRIM62Q9BVG3 475 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 ASNSD1Q9NWL6 643 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 GPSM3Q9Y4H4 160 aa13.15□□□□□ -0.3
COPB1-208ENST00000532088 EPN1Q9Y6I3 576 aaPredicted RBP13.15□□□□□ -0.3
COPB1-208ENST00000532088 CCDC195A0A1B0GUA6 201 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 ANKRD62A6NC57 917 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 SOWAHDA6NJG2 315 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 E5RJQ4 531 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 SOAT2O75908 522 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 NDUFA10O95299 355 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 ZBED1O96006 694 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 GLI1P08151 1106 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 PFKLP17858 780 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 GTF2F1P35269 517 aaKnown RBP eCLIP13.14□□□□□ -0.31
COPB1-208ENST00000532088 TKTL1P51854 596 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 MRPS5P82675 430 aaKnown RBP13.14□□□□□ -0.31
COPB1-208ENST00000532088 CCZ1BP86790 482 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 CCZ1P86791 482 aaPredicted RBP13.14□□□□□ -0.31
COPB1-208ENST00000532088 GFPT1Q06210 699 aaPredicted RBP13.14□□□□□ -0.31
COPB1-208ENST00000532088 PTP4A2Q12974 167 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 SPA17Q15506 151 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 PABPC1LQ4VXU2 614 aaKnown RBP13.14□□□□□ -0.31
COPB1-208ENST00000532088 CCDC122Q5T0U0 273 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 SNX30Q5VWJ9 437 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 LLGL2Q6P1M3 1020 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 TOGARAM2Q6ZUX3 1019 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 Q7L0L9 218 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 ARCQ7LC44 396 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 GPRIN1Q7Z2K8 1008 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 MCOLN2Q8IZK6 566 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 TXLNBQ8N3L3 684 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 ZNF276Q8N554 614 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 CPA5Q8WXQ8 436 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms