RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 GIPC1O14908 333 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 HNRNPDLO14979 420 aaKnown RBP7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 FLNBO75369 2602 aaKnown RBP7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 PIGRP01833 764 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 RETP07949 1114 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 GSTP1P09211 210 aaKnown RBP7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 PFKFB1P16118 471 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 CEBPBP17676 345 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 GSTT1P30711 240 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 BRCC3P46736 316 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 FNTBP49356 437 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 ACOT2P49753 483 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 GUCY2FP51841 1108 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 NDUFA8P51970 172 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 YARSP54577 528 aaKnown RBP7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 PFKPQ01813 784 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 ADCY1Q08828 1119 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 HSP90AA2PQ14568 343 aaPredicted RBP7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 NFKBIBQ15653 356 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 UPP1Q16831 310 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 PABPC1LQ4VXU2 614 aaKnown RBP7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 N4BP2L1Q5TBK1 243 aaPredicted RBP7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 FAM171A1Q5VUB5 890 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 HEATR6Q6AI08 1181 aaKnown RBP7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 MTSS1LQ765P7 747 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 SETXQ7Z333 2677 aaKnown RBP7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 PDZD3Q86UT5 571 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 LNX1Q8TBB1 728 aaPredicted RBP7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 SHKBP1Q8TBC3 707 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 EZH1Q92800 747 aaPredicted RBP7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 PAGE5Q96GU1 130 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 CCDC94Q9BW85 323 aaPredicted RBP7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 TNMDQ9H2S6 317 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 GOLPH3LQ9H4A5 285 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 GSX1Q9H4S2 264 aaPredicted RBP7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 C2orf42Q9NWW7 574 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 ANGPTL2Q9UKU9 493 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 RAB23Q9ULC3 237 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 AP4E1Q9UPM8 1137 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 HPSEQ9Y251 543 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 MRPS23Q9Y3D9 190 aaKnown RBP7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 STYXL1Q9Y6J8 313 aa7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 ZFP37Q9Y6Q3 630 aaPredicted RBP7.57□□□□□ -1.2
TRIM53CP-201ENST00000531490 DSPP15924 2871 aaKnown RBP7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 ANKRD33BA6NCL7 494 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 PRR19A6NJB7 356 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 OGTO15294 1046 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 KLRC4O43908 158 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 B3GAT3O94766 335 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 GCNT3O95395 438 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 CLTAP09496 248 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 HNRNPA1P09651 372 aaKnown RBP eCLIP7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 SLFN14P0C7P3 912 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 KCNE1P15382 129 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 GAP43P17677 238 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 PMLP29590 882 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 SSTR4P31391 388 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 RPS9P46781 194 aaKnown RBP7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 ASIC1P78348 528 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 SIM2Q14190 667 aaPredicted RBP7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 SF3A2Q15428 464 aaKnown RBP7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 ZBTB6Q15916 424 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 PSMD5Q16401 504 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 L1TD1Q5T7N2 865 aaKnown RBP7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 LAIR1Q6GTX8 287 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 CNNM4Q6P4Q7 775 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 SULF2Q8IWU5 870 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 CCDC65Q8IXS2 484 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 TCEAL4Q96EI5 215 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 FAM84AQ96KN4 292 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 ACCSQ96QU6 501 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 TTPALQ9BTX7 342 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 MSTO1Q9BUK6 570 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 SCAND2PQ9GZW5 306 aaPredicted RBP7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 CUEDC2Q9H467 287 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 PCIF1Q9H4Z3 704 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 LMAN1LQ9HAT1 526 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 SLC39A2Q9NP94 309 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 OLFML3Q9NRN5 406 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 TOPORSQ9NS56 1045 aaPredicted RBP7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 RBM12Q9NTZ6 932 aaKnown RBP7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 SEL1LQ9UBV2 794 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 TUBGCP4Q9UGJ1 667 aa7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 CPSF3Q9UKF6 684 aaKnown RBP7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 SMG1Q96Q15 3661 aaKnown RBP7.56□□□□□ -1.2
TRIM53CP-201ENST00000531490 ZMYM2Q9UBW7 1377 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 SF3B1O75533 1304 aaKnown RBP eCLIP7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 FAM237AA0A1B0GTK4 181 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 GOLGA8IPA6NC78 632 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 GOLGA8JA6NMD2 632 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 PPEF2O14830 753 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 NCAM2O15394 837 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 ECI2O75521 394 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 C1RP00736 705 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 ADRB2P07550 413 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 RHOP08100 348 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 NFICP08651 508 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 FCARP24071 287 aa7.55□□□□□ -1.2
TRIM53CP-201ENST00000531490 OR1D2P34982 312 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms