RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 BBS7Q8IWZ6 715 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 CXorf38Q8TB03 319 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 MDM1Q8TC05 714 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 BHMTQ93088 406 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 C8orf48Q96LL4 319 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 ACOX2Q99424 681 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 ZNF518BQ9C0D4 1074 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 DPEP3Q9H4B8 488 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 PRDM16Q9HAZ2 1276 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 SPHK2Q9NRA0 654 aa9.82□□□□□ -0.84
NEDD8-206ENST00000531430 DNAJC17Q9NVM6 304 aaKnown RBP9.82□□□□□ -0.84
NEDD8-206ENST00000531430 NXF1Q9UBU9 619 aaKnown RBP9.82□□□□□ -0.84
NEDD8-206ENST00000531430 APOBEC2Q9Y235 224 aaKnown RBP9.82□□□□□ -0.84
NEDD8-206ENST00000531430 A0A1W2PQD8 194 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 E2F8A0AVK6 867 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 UPK3BL1B0FP48 263 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 WASH3PC4AMC7 463 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 UPK3BL2E5RIL1 263 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 NEDD8-MDP1E9PL57 170 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 COCHO43405 550 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 PHACTR2O75167 634 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 PPP1R37O75864 691 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 BMP15O95972 392 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 OAS1P00973 400 aaKnown RBP9.81□□□□□ -0.84
NEDD8-206ENST00000531430 HOXD12P35452 270 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 TXLNAP40222 546 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 NOP14P78316 857 aaKnown RBP9.81□□□□□ -0.84
NEDD8-206ENST00000531430 WDR72Q3MJ13 1102 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 WDR45BQ5MNZ6 344 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 EGFLAMQ63HQ2 1017 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 TRAPPC11Q7Z392 1133 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 MIB1Q86YT6 1006 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 CBWD2Q8IUF1 395 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 NAXDQ8IW45 347 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 SCAMP5Q8TAC9 235 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 IPO4Q8TEX9 1081 aaKnown RBP9.81□□□□□ -0.84
NEDD8-206ENST00000531430 WBP2Q969T9 261 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 CCDC127Q96BQ5 260 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 TMX3Q96JJ7 454 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 CLIC6Q96NY7 704 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 XPO6Q96QU8 1125 aaKnown RBP9.81□□□□□ -0.84
NEDD8-206ENST00000531430 KCNK16Q96T55 309 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 TTLL2Q9BWV7 592 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 STRA6Q9BX79 667 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 BBS2Q9BXC9 721 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 B3GNT5Q9BYG0 378 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 FAM124BQ9H5Z6 455 aaPredicted RBP9.81□□□□□ -0.84
NEDD8-206ENST00000531430 CCSER2Q9H7U1 834 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 CAPN10Q9HC96 672 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 CD93Q9NPY3 652 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 SEL1LQ9UBV2 794 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 RAXQ9Y2V3 346 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 GPSM3Q9Y4H4 160 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 CLIC4Q9Y696 253 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 CEP192Q8TEP8 1941 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 PTPRJQ12913 1337 aa9.81□□□□□ -0.84
NEDD8-206ENST00000531430 PTPRDP23468 1912 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 ADAMTS20P59510 1910 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 VPS37CA5D8V6 355 aaPredicted RBP9.8□□□□□ -0.84
NEDD8-206ENST00000531430 FAM221BA6H8Z2 402 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 MEI4A8MW99 385 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 CLIC2O15247 247 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 RTN3O95197 1032 aaPredicted RBP9.8□□□□□ -0.84
NEDD8-206ENST00000531430 NDUFV2P19404 249 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 STAT6P42226 847 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 SLCO6A1Q86UG4 719 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 MARCH9Q86YJ5 346 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 TERB1Q8NA31 727 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 PDZD8Q8NEN9 1154 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 KCNV2Q8TDN2 545 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 RHBDD1Q8TEB9 315 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 HPS3Q969F9 1004 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 DNAJC19Q96DA6 116 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 OTUB2Q96DC9 234 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 CEP295NLQ96MC4 621 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 KIF2CQ99661 725 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 GPR174Q9BXC1 333 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 FGFBP2Q9BYJ0 223 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 ELOVL4Q9GZR5 314 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 DNAAF2Q9NVR5 837 aaKnown RBP9.8□□□□□ -0.84
NEDD8-206ENST00000531430 PPP4R2Q9NY27 417 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 CACNA2D2Q9NY47 1150 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 STK17AQ9UEE5 414 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 SUSD2Q9UGT4 822 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 NME7Q9Y5B8 376 aa9.8□□□□□ -0.84
NEDD8-206ENST00000531430 KIAA1549LQ6ZVL6 1849 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 ASXL3Q9C0F0 2248 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 A0A1W2PQF6 199 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 PRRT4C9JH25 899 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 OLFM2O95897 454 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 TBX18O95935 607 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 TYRP14679 529 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 CYP2J2P51589 502 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 CDH8P55286 799 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 GRIK2Q13002 908 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 SLC14A1Q13336 389 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 ALCAMQ13740 583 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 PEAR1Q5VY43 1037 aaPredicted RBP9.79□□□□□ -0.84
NEDD8-206ENST00000531430 CCNI2Q6ZMN8 369 aaPredicted RBP9.79□□□□□ -0.84
NEDD8-206ENST00000531430 TOGARAM2Q6ZUX3 1019 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms