RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 H0YCG3 227 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 PYCARD-AS1I3L0S3 204 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 TERTO14746 1132 aaKnown RBP3.76□□□□□ -1.81
PTPRC-213ENST00000529828 TRAK2O60296 914 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 NDUFS2O75306 463 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 TULP3O75386 442 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 GJB3O75712 270 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 C1QL1O75973 258 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 ADH1CP00326 375 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 SYPP08247 313 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 PDGFRBP09619 1106 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 ATXN1LP0C7T5 689 aaKnown RBP3.76□□□□□ -1.81
PTPRC-213ENST00000529828 LMO2P25791 158 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 ITPKBP27987 946 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 DDIT3P35638 169 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 GRIA2P42262 883 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 TRAPPC10P48553 1259 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 CACNA2D1P54289 1103 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 BYSLQ13895 437 aaKnown RBP3.76□□□□□ -1.81
PTPRC-213ENST00000529828 MCM6Q14566 821 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 ANO4Q32M45 955 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 TMEM119Q4V9L6 283 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 MDH1BQ5I0G3 518 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 SLC36A4Q6YBV0 504 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 DENND5BQ6ZUT9 1274 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 CHPFQ8IZ52 775 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 ADGRG2Q8IZP9 1017 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 PHTF2Q8N3S3 785 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 CSGALNACT2Q8N6G5 542 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 FAM184AQ8NB25 1140 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 GLIS3Q8NEA6 775 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 FBXO18Q8NFZ0 1043 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 LEO1Q8WVC0 666 aaPredicted RBP3.76□□□□□ -1.81
PTPRC-213ENST00000529828 POMGNT1Q8WZA1 660 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 BHMTQ93088 406 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 WBP2Q969T9 261 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 FIZ1Q96SL8 496 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 SYT15Q9BQS2 421 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 ACBD6Q9BR61 282 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 MTMR12Q9C0I1 747 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 CCSER1Q9C0I3 900 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 ASB7Q9H672 318 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 PARVGQ9HBI0 331 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 ABCB6Q9NP58 842 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 CRTAC1Q9NQ79 661 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 CACNA2D2Q9NY47 1150 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 PCOLCE2Q9UKZ9 415 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 APOBEC2Q9Y235 224 aaKnown RBP3.76□□□□□ -1.81
PTPRC-213ENST00000529828 BTBD3Q9Y2F9 522 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 FNDC3AQ9Y2H6 1198 aaKnown RBP3.76□□□□□ -1.81
PTPRC-213ENST00000529828 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.76□□□□□ -1.81
PTPRC-213ENST00000529828 BSNQ9UPA5 3926 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 TCHHQ07283 1943 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 KNL1Q8NG31 2342 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 PTPRJQ12913 1337 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 SPTA1P02549 2419 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 A0A1W2PQD8 194 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 TRABD2BA6NFA1 517 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 WASH3PC4AMC7 463 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 F8VP50 259 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 CLDN5O00501 218 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 EPB41L2O43491 1005 aaKnown RBP3.76□□□□□ -1.81
PTPRC-213ENST00000529828 CBFA2T3O75081 653 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 TBCAO75347 108 aaKnown RBP3.76□□□□□ -1.81
PTPRC-213ENST00000529828 PAX3P23760 479 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 ANXA13P27216 316 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 ADSSP30520 456 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 HOXD12P35452 270 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 DPP6P42658 865 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 KCNA1Q09470 495 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 C19orf57Q0VDD7 668 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 TAF10Q12962 218 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 SOWAHAQ2M3V2 549 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 CFAP221Q4G0U5 840 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 SPDYCQ5MJ68 293 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 HYIQ5T013 277 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 BTBD8Q5XKL5 378 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 MCTP1Q6DN14 999 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 LAYNQ6UX15 382 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 TMEM25Q86YD3 366 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 BBS7Q8IWZ6 715 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 TERB1Q8NA31 727 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 RASSF8Q8NHQ8 419 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 IPO4Q8TEX9 1081 aaKnown RBP3.76□□□□□ -1.81
PTPRC-213ENST00000529828 KBTBD7Q8WVZ9 684 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 PCIF1Q9H4Z3 704 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 GAREM1Q9H706 876 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 TMEM30AQ9NV96 361 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 TOR4AQ9NXH8 423 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 TBC1D7Q9P0N9 293 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 GMPR2Q9P2T1 348 aaKnown RBP3.76□□□□□ -1.81
PTPRC-213ENST00000529828 MAGEC2Q9UBF1 373 aaPredicted RBP3.76□□□□□ -1.81
PTPRC-213ENST00000529828 SIX4Q9UIU6 781 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.76□□□□□ -1.81
PTPRC-213ENST00000529828 SLCO1B1Q9Y6L6 691 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 PLXNB3Q9ULL4 1909 aa3.76□□□□□ -1.81
PTPRC-213ENST00000529828 MYOFQ9NZM1 2061 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 MYH11P35749 1972 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 HELZP42694 1942 aaKnown RBP3.75□□□□□ -1.81
PTPRC-213ENST00000529828 ANAPC1Q9H1A4 1944 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms