RNA–Protein interactions for RNA: ENST00000529724.1

PPP1CA-206, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2

Gene PPP1CA, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-206ENST00000529724 CCSER1Q9C0I3 900 aa11.22□□□□□ -0.61
PPP1CA-206ENST00000529724 MKRN2Q9H000 416 aaKnown RBP11.22□□□□□ -0.61
PPP1CA-206ENST00000529724 TM9SF3Q9HD45 589 aa11.22□□□□□ -0.61
PPP1CA-206ENST00000529724 OSGEPQ9NPF4 335 aa11.22□□□□□ -0.61
PPP1CA-206ENST00000529724 STARD5Q9NSY2 213 aa11.22□□□□□ -0.61
PPP1CA-206ENST00000529724 GJB4Q9NTQ9 266 aa11.22□□□□□ -0.61
PPP1CA-206ENST00000529724 POLQO75417 2590 aa11.21□□□□□ -0.61
PPP1CA-206ENST00000529724 A0A1B0GTQ1 180 aa11.21□□□□□ -0.61
PPP1CA-206ENST00000529724 PRRT4C9JH25 899 aa11.21□□□□□ -0.61
PPP1CA-206ENST00000529724 FAM189A1O60320 539 aa11.21□□□□□ -0.61
PPP1CA-206ENST00000529724 IGLV3-19P01714 112 aa11.21□□□□□ -0.61
PPP1CA-206ENST00000529724 GRIK1P39086 918 aa11.21□□□□□ -0.61
PPP1CA-206ENST00000529724 GRIA4P48058 902 aa11.21□□□□□ -0.61
PPP1CA-206ENST00000529724 TPMTP51580 245 aa11.21□□□□□ -0.61
PPP1CA-206ENST00000529724 EVCP57679 992 aa11.21□□□□□ -0.61
PPP1CA-206ENST00000529724 PPP2R3AQ06190 1150 aa11.21□□□□□ -0.61
PPP1CA-206ENST00000529724 DRC1Q96MC2 740 aa11.21□□□□□ -0.61
PPP1CA-206ENST00000529724 CLCA2Q9UQC9 943 aa11.21□□□□□ -0.61
PPP1CA-206ENST00000529724 MAN2B2Q9Y2E5 1009 aa11.21□□□□□ -0.61
PPP1CA-206ENST00000529724 PCDHB1Q9Y5F3 818 aa11.21□□□□□ -0.61
PPP1CA-206ENST00000529724 CENPEQ02224 2701 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 ZNF840PA6NDX5 716 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 GFRA2O00451 464 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 SLC16A4O15374 487 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 CLDN3O15551 220 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 DXOO77932 396 aaKnown RBP11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 ITGB6P18564 788 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 RPA1P27694 616 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 OXTRP30559 389 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 USP46P62068 366 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 INSM1Q01101 510 aaPredicted RBP11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 TSPY1Q01534 308 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 MAPK7Q13164 816 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 AAMPQ13685 434 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 PDIA5Q14554 519 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 SHBQ15464 509 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 TEAD4Q15561 434 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 ECM1Q16610 540 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 LINC00303Q3SY05 128 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 BTBD8Q5XKL5 378 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 HIST2H2BCQ6DN03 193 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 JADE1Q6IE81 842 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 ZPBP2Q6X784 338 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 TNFRSF25Q93038 417 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 DPH1Q9BZG8 443 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 TMEM60Q9H2L4 133 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 BHMT2Q9H2M3 363 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 RPF1Q9H9Y2 349 aaKnown RBP11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 KMT5AQ9NQR1 393 aa11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 RBM19Q9Y4C8 960 aaKnown RBP11.2□□□□□ -0.62
PPP1CA-206ENST00000529724 NEMFO60524 1076 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 OAS1P00973 400 aaKnown RBP11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 MPOP05164 745 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 TAF6P49848 677 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 RIPPLY3P57055 190 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 NR5A1Q13285 461 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 ILKQ13418 452 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 CFAP221Q4G0U5 840 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 GRAMD4Q6IC98 578 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 NUDT18Q6ZVK8 323 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 TMEM25Q86YD3 366 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 SNX19Q92543 992 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 TSPAN18Q96SJ8 248 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 ORAI3Q9BRQ5 295 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 NUP58Q9BVL2 599 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 TRIM9Q9C026 710 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 PCED1AQ9H1Q7 454 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 C6orf106Q9H6K1 298 aaPredicted RBP11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 SPHK2Q9NRA0 654 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 DNAJC17Q9NVM6 304 aaKnown RBP11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 TRPM5Q9NZQ8 1165 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 TBC1D14Q9P2M4 693 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 PCDHB6Q9Y5E3 794 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 TCHHQ07283 1943 aa11.19□□□□□ -0.62
PPP1CA-206ENST00000529724 CACNA1DQ01668 2161 aa11.18□□□□□ -0.62
PPP1CA-206ENST00000529724 LRBAP50851 2863 aa11.18□□□□□ -0.62
PPP1CA-206ENST00000529724 LAD1O00515 517 aa11.18□□□□□ -0.62
PPP1CA-206ENST00000529724 HIP1RO75146 1068 aa11.18□□□□□ -0.62
PPP1CA-206ENST00000529724 ACAT1P24752 427 aaKnown RBP11.18□□□□□ -0.62
PPP1CA-206ENST00000529724 ERVPABLB-1P60509 514 aa11.18□□□□□ -0.62
PPP1CA-206ENST00000529724 TLE1Q04724 770 aa11.18□□□□□ -0.62
PPP1CA-206ENST00000529724 ORC1Q13415 861 aa11.18□□□□□ -0.62
PPP1CA-206ENST00000529724 INTS6LQ5JSJ4 861 aaKnown RBP11.18□□□□□ -0.62
PPP1CA-206ENST00000529724 PRAMEF14Q5SWL7 426 aa11.18□□□□□ -0.62
PPP1CA-206ENST00000529724 KDM7AQ6ZMT4 941 aa11.18□□□□□ -0.62
PPP1CA-206ENST00000529724 SCN4BQ8IWT1 228 aa11.18□□□□□ -0.62
PPP1CA-206ENST00000529724 BBS7Q8IWZ6 715 aa11.18□□□□□ -0.62
PPP1CA-206ENST00000529724 EID2Q8N6I1 236 aa11.18□□□□□ -0.62
PPP1CA-206ENST00000529724 SAP25Q8TEE9 199 aa11.18□□□□□ -0.62
PPP1CA-206ENST00000529724 OTUB2Q96DC9 234 aa11.18□□□□□ -0.62
PPP1CA-206ENST00000529724 ASCL3Q9NQ33 180 aa11.18□□□□□ -0.62
PPP1CA-206ENST00000529724 LRWD1Q9UFC0 647 aa11.18□□□□□ -0.62
PPP1CA-206ENST00000529724 GTF3C4Q9UKN8 822 aa11.18□□□□□ -0.62
PPP1CA-206ENST00000529724 STON1Q9Y6Q2 735 aa11.18□□□□□ -0.62
PPP1CA-206ENST00000529724 HCRTO43612 131 aa11.17□□□□□ -0.62
PPP1CA-206ENST00000529724 DFNA5O60443 496 aa11.17□□□□□ -0.62
PPP1CA-206ENST00000529724 MT-CO3P00414 261 aa11.17□□□□□ -0.62
PPP1CA-206ENST00000529724 MAGEA11P43364 429 aa11.17□□□□□ -0.62
PPP1CA-206ENST00000529724 COPAP53621 1224 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms