RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 ZNF786Q8N393 782 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 TMCO5AQ8N6Q1 288 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 ACTRT1Q8TDG2 376 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 SYTL5Q8TDW5 730 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-220ENST00000529526 EDEM1Q92611 657 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 GMCL1Q96IK5 515 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 SCN3BQ9NY72 215 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 SLC25A13Q9UJS0 675 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 FZD1Q9UP38 647 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 TMX2Q9Y320 296 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 H7C4K7 107 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 NR5A2O00482 541 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 GLI1P08151 1106 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 WEE1P30291 646 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 HNRNPH1P31943 449 aaKnown RBP8.39□□□□□ -1.07
CTNND1-220ENST00000529526 VHLP40337 213 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 TKTL1P51854 596 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 MFSD4BQ5TF39 518 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 TTC33Q6PID6 262 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-220ENST00000529526 SETD3Q86TU7 594 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-220ENST00000529526 MTDHQ86UE4 582 aaKnown RBP8.39□□□□□ -1.07
CTNND1-220ENST00000529526 COLGALT1Q8NBJ5 622 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 MYCBPAPQ8TBZ2 947 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 CACNA2D2Q9NY47 1150 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 BLOC1S6Q9UL45 172 aa8.39□□□□□ -1.07
CTNND1-220ENST00000529526 SMNDC1O75940 238 aaKnown RBP eCLIP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 USP1O94782 785 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 PROSCO94903 275 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 POMCP01189 267 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 JCHAINP01591 159 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 ALBP02768 609 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 PCNAP12004 261 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 NQO1P15559 274 aaKnown RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 ACAT1P24752 427 aaKnown RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 RPL10AP62906 217 aaKnown RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 CACHD1Q5VU97 1274 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 PAPD7Q5XG87 772 aaKnown RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 PLEKHM3Q6ZWE6 761 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 EFL1Q7Z2Z2 1120 aaKnown RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 TRIM48Q8IWZ4 208 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 TDRD5Q8NAT2 981 aaKnown RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 FBXO25Q8TCJ0 367 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 OPTNQ96CV9 577 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 FRMD8P1Q9BZ68 369 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 MTIF3Q9H2K0 278 aaKnown RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 MEGF6O75095 1541 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 LOC102724159A0A0B4J2E5 919 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 RGL2O15211 777 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 GRIN3BO60391 1043 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 VPS26AO75436 327 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 CPSF4O95639 269 aaKnown RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 APOA4P06727 396 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 ALOX15P16050 662 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 TPH1P17752 444 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 PSMA4P25789 261 aaKnown RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 GCLCP48506 637 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 PRIM2P49643 509 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 PWP2Q15269 919 aaKnown RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 NTRK3Q16288 839 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 WLSQ5T9L3 541 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 TIGD7Q6NT04 549 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 CENPLQ8N0S6 344 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 VPS37AQ8NEZ2 397 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 PTPRHQ9HD43 1115 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 PALMDQ9NP74 551 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 DIP2BQ9P265 1576 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 THP07101 528 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 ITGB6P18564 788 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 DNAJB2P25686 324 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 SERPINB3P29508 390 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 ATN1P54259 1190 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 CYP51A1Q16850 503 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 CYB5D1Q6P9G0 228 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 P3H2Q8IVL5 708 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 PRPF18Q99633 342 aaKnown RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 LRRC40Q9H9A6 602 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 NRXN1Q9ULB1 1477 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 AK9Q5TCS8 1911 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 F8W810 466 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 CBX4O00257 560 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 LZTS3O60299 673 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 H2AFYO75367 372 aaKnown RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 MT-CO1P00395 513 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 CCDC159P0C7I6 412 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 ZNF23P17027 643 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 CLK1P49759 484 aaKnown RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 PTPN11Q06124 597 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 ITIH4Q14624 930 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 SLC9A5Q14940 896 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 SV2AQ7L0J3 742 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 TMC2Q8TDI7 906 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 DDI1Q8WTU0 396 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 TRAPPC12Q8WVT3 735 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 TMEM169Q96HH4 297 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 FRMD8Q9BZ67 464 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 UBE2OQ9C0C9 1292 aaKnown RBP8.38□□□□□ -1.07
CTNND1-220ENST00000529526 RERGLQ9H628 205 aa8.38□□□□□ -1.07
CTNND1-220ENST00000529526 DDX43Q9NXZ2 648 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms