RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, human

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUF60-213	ENST00000528999	KCTD19	Q17RG1	926 aa	Predicted RBP	11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	UBXN11	Q5T124	520 aa		11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	CYP4F22	Q6NT55	531 aa		11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	C3orf62	Q6ZUJ4	267 aa		11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	CYS1	Q717R9	158 aa		11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	RPAIN	Q86UA6	219 aa		11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	C12orf29	Q8N999	325 aa		11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	FAM71D	Q8N9W8	422 aa		11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	ACSF2	Q96CM8	615 aa	Predicted RBP	11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	PEBP4	Q96S96	227 aa		11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	PPP1R16B	Q96T49	567 aa		11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	CYTH2	Q99418	400 aa		11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	OSMR	Q99650	979 aa		11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	TRABD	Q9H4I3	376 aa		11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	CDHR5	Q9HBB8	845 aa		11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	PCDH18	Q9HCL0	1135 aa		11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	DNAJC17	Q9NVM6	304 aa	Known RBP	11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	HAUS2	Q9NVX0	235 aa		11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	TMEM51	Q9NW97	253 aa		11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	XPO7	Q9UIA9	1087 aa	Known RBP	11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	ARL2BP	Q9Y2Y0	163 aa		11.15	□□□□□ -0.62
PUF60-213	ENST00000528999	DNAJC8	O75937	253 aa	Predicted RBP	11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	CELF2	O95319	508 aa	Known RBP	11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	ASMTL	O95671	621 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	OAS1	P00973	400 aa	Known RBP	11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	L1CAM	P32004	1257 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	MSH2	P43246	934 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	LIG3	P49916	1009 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	ZNF135	P52742	658 aa	Predicted RBP	11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	GPX6	P59796	221 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	CDK16	Q00536	496 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	KCNJ11	Q14654	390 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	LGSN	Q5TDP6	509 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	TRNP1	Q6NT89	227 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	C17orf99	Q6UX52	265 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	PRUNE1	Q86TP1	453 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	RSPH3	Q86UC2	560 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	SCUBE3	Q8IX30	993 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	SRRM1	Q8IYB3	904 aa	Known RBP	11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	TMEM86A	Q8N2M4	240 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	KBTBD7	Q8WVZ9	684 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	DNAJB3	Q8WWF6	145 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	C18orf25	Q96B23	403 aa	Predicted RBP	11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	SLC9A7	Q96T83	725 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	ELAC2	Q9BQ52	826 aa	Known RBP	11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	FERMT1	Q9BQL6	677 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	DUSP16	Q9BY84	665 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	OSBPL7	Q9BZF2	842 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	KLC2	Q9H0B6	622 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	RRN3	Q9NYV6	651 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	TUBGCP4	Q9UGJ1	667 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	PIN4	Q9Y237	131 aa	Known RBP	11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	RAD54B	Q9Y620	910 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	RALGAPA2	Q2PPJ7	1873 aa		11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	GOLGB1	Q14789	3259 aa	Known RBP	11.14	□□□□□ -0.63
PUF60-213	ENST00000528999	CLUH	O75153	1309 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.13	□□□□□ -0.63	8e-14	■■■■■ 114.9
PUF60-213	ENST00000528999	IQANK1	A0A1B0GTG1	560 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	CFAP73	A6NFT4	308 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	TCP11X1	B4DZS4	312 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	POC1B-GALNT4	F8VUJ3	575 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999		M0QZ92	97 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	GABRD	O14764	452 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	TM9SF1	O15321	606 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	ADCY6	O43306	1168 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	DUSP11	O75319	330 aa	Known RBP	11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	FBXO21	O94952	628 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	ITGBL1	O95965	494 aa	Predicted RBP	11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	KRT15	P19012	456 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	TPSB2	P20231	275 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	RPL9	P32969	192 aa	Known RBP	11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	MATK	P42679	507 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	LHX1	P48742	406 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	RGS7	P49802	495 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	GDF10	P55107	478 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	HDAC4	P56524	1084 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	LILRA4	P59901	499 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	SARNP	P82979	210 aa	Known RBP	11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	CCDC15	Q0P6D6	951 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	MPP2	Q14168	576 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	TMED2	Q15363	201 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	MTFR1	Q15390	333 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	TAF5	Q15542	800 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	TPSAB1	Q15661	275 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	C15orf59	Q2T9L4	293 aa	Predicted RBP	11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	SLC25A52	Q3SY17	297 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	FNBP1L	Q5T0N5	605 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	RNF43	Q68DV7	783 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	SCYL2	Q6P3W7	929 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	TRPM8	Q7Z2W7	1104 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	PQLC3	Q8N755	202 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	C7orf31	Q8N865	590 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	PCDH19	Q8TAB3	1148 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	NT5C3B	Q969T7	300 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	APBA2	Q99767	749 aa		11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	SNRNP25	Q9BV90	132 aa	Known RBP	11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	NXF3	Q9H4D5	531 aa	Known RBP	11.13	□□□□□ -0.63
PUF60-213	ENST00000528999	NRDE2	Q9H7Z3	1164 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms