RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 HSFX1Q9UBD0 423 aa3.74□□□□□ -1.81
BRCA2-203ENST00000528762 SLC13A4Q9UKG4 626 aa3.74□□□□□ -1.81
BRCA2-203ENST00000528762 SORCS3Q9UPU3 1222 aa3.74□□□□□ -1.81
BRCA2-203ENST00000528762 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.74□□□□□ -1.81
BRCA2-203ENST00000528762 SPATA31A3Q5VYP0 1347 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 PNMA6EA0A0J9YXQ4 647 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 A0A1B0GTW7 788 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 OR2W5A6NFC9 320 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 GOLGA6L6A8MZA4 724 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 DIRC3C9JPN6 131 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 LEFTY2O00292 366 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 TOR1BO14657 336 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 PCDH17O14917 1159 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 ZSCAN9O15535 394 aaPredicted RBP3.73□□□□□ -1.81
BRCA2-203ENST00000528762 PPFIA2O75334 1257 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 ERN1O75460 977 aaKnown RBP3.73□□□□□ -1.81
BRCA2-203ENST00000528762 RNASEH2AO75792 299 aaKnown RBP3.73□□□□□ -1.81
BRCA2-203ENST00000528762 SUN1O94901 812 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 GPANK1O95872 356 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 VIPP01282 170 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 POLBP06746 335 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 KCNA2P16389 499 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 ITGALP20701 1170 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 MST1P26927 711 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 ADD2P35612 726 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 PAPOLAP51003 745 aaKnown RBP3.73□□□□□ -1.81
BRCA2-203ENST00000528762 SCAPQ12770 1279 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 CUL4BQ13620 913 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 DYRK1AQ13627 763 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 ATP1A4Q13733 1029 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 ZIK1Q3SY52 487 aaPredicted RBP3.73□□□□□ -1.81
BRCA2-203ENST00000528762 DCAF17Q5H9S7 520 aaPredicted RBP3.73□□□□□ -1.81
BRCA2-203ENST00000528762 RABL3Q5HYI8 236 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 SFRP4Q6FHJ7 346 aaPredicted RBP3.73□□□□□ -1.81
BRCA2-203ENST00000528762 RINT1Q6NUQ1 792 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 SLC44A2Q8IWA5 706 aaPredicted RBP3.73□□□□□ -1.81
BRCA2-203ENST00000528762 ULK2Q8IYT8 1036 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 SCAMP5Q8TAC9 235 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 PROKR1Q8TCW9 393 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 WDR60Q8WVS4 1066 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 TRAPPC9Q96Q05 1148 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 HIST1H2AAQ96QV6 131 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 PYM1Q9BRP8 204 aaKnown RBP3.73□□□□□ -1.81
BRCA2-203ENST00000528762 RTKNQ9BST9 563 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 SLC26A6Q9BXS9 759 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 TWSG1Q9GZX9 223 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 BRD8Q9H0E9 1235 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 ZCWPW1Q9H0M4 648 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 SLC25A32Q9H2D1 315 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 GBA2Q9HCG7 927 aaPredicted RBP3.73□□□□□ -1.81
BRCA2-203ENST00000528762 ALG13Q9NP73 1137 aaKnown RBP3.73□□□□□ -1.81
BRCA2-203ENST00000528762 UBN1Q9NPG3 1134 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 CTTNBP2NLQ9P2B4 639 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 DNAJB11Q9UBS4 358 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 FEM1BQ9UK73 627 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 NDRG4Q9ULP0 352 aaKnown RBP3.73□□□□□ -1.81
BRCA2-203ENST00000528762 USP22Q9UPT9 525 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 USP15Q9Y4E8 981 aaPredicted RBP3.73□□□□□ -1.81
BRCA2-203ENST00000528762 LAS1LQ9Y4W2 734 aaKnown RBP3.73□□□□□ -1.81
BRCA2-203ENST00000528762 AATKQ6ZMQ8 1374 aa3.73□□□□□ -1.81
BRCA2-203ENST00000528762 B4E171 279 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 CD3EAPO15446 510 aaKnown RBP3.72□□□□□ -1.81
BRCA2-203ENST00000528762 HOXC11O43248 304 aaPredicted RBP3.72□□□□□ -1.81
BRCA2-203ENST00000528762 TRIAP1O43715 76 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 SNX2O60749 519 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 SRGAP2O75044 1071 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 SCAF4O95104 1147 aaKnown RBP3.72□□□□□ -1.81
BRCA2-203ENST00000528762 PRKCBP05771 671 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 SLC5A2P31639 672 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 TSPAN7P41732 249 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 LIFRP42702 1097 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 GATMP50440 423 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 ANXA11P50995 505 aaKnown RBP3.72□□□□□ -1.81
BRCA2-203ENST00000528762 CCR5P51681 352 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 RNASE9P60153 205 aaKnown RBP3.72□□□□□ -1.81
BRCA2-203ENST00000528762 HSD11B2P80365 405 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 CCNIQ14094 377 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 HLXQ14774 488 aaPredicted RBP3.72□□□□□ -1.81
BRCA2-203ENST00000528762 ARHGAP40Q5TG30 622 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 NAIF1Q69YI7 327 aaPredicted RBP3.72□□□□□ -1.81
BRCA2-203ENST00000528762 DPY19L2P1Q6NXN4 242 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 FAM180BQ6P0A1 224 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 C16orf54Q6UWD8 224 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 RSRC2Q7L4I2 434 aaKnown RBP3.72□□□□□ -1.81
BRCA2-203ENST00000528762 CLNKQ7Z7G1 428 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 C2CD5Q86YS7 1000 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 SLC15A3Q8IY34 581 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 Q8NA96 180 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 OR56A1Q8NGH5 318 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 DNAJB14Q8TBM8 379 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 THAP4Q8WY91 577 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 HAS1Q92839 578 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 ZDHHC12Q96GR4 267 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 ZNF668Q96K58 619 aaPredicted RBP3.72□□□□□ -1.81
BRCA2-203ENST00000528762 TMX4Q9H1E5 349 aaPredicted RBP3.72□□□□□ -1.81
BRCA2-203ENST00000528762 UNC45AQ9H3U1 944 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 PRDM8Q9NQV8 689 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 RNF181Q9P0P0 153 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 LPAR3Q9UBY5 353 aa3.72□□□□□ -1.81
BRCA2-203ENST00000528762 EIF2B4Q9UI10 523 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms