RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 CA8P35219 290 aa19.69■□□□□ 0.74
SMPD1-203ENST00000527275 GABRB2P47870 512 aa19.69■□□□□ 0.74
SMPD1-203ENST00000527275 PPP2R5EQ16537 467 aa19.69■□□□□ 0.74
SMPD1-203ENST00000527275 SCUBE3Q8IX30 993 aa19.69■□□□□ 0.74
SMPD1-203ENST00000527275 IPO4Q8TEX9 1081 aaKnown RBP19.69■□□□□ 0.74
SMPD1-203ENST00000527275 GDAP1L1Q96MZ0 367 aa19.69■□□□□ 0.74
SMPD1-203ENST00000527275 TCF25Q9BQ70 676 aa19.69■□□□□ 0.74
SMPD1-203ENST00000527275 C11orf84Q9BUA3 381 aaPredicted RBP19.69■□□□□ 0.74
SMPD1-203ENST00000527275 CRISPLD1Q9H336 500 aa19.69■□□□□ 0.74
SMPD1-203ENST00000527275 CERS4Q9HA82 394 aa19.69■□□□□ 0.74
SMPD1-203ENST00000527275 DMAP1Q9NPF5 467 aaPredicted RBP19.69■□□□□ 0.74
SMPD1-203ENST00000527275 AMACRQ9UHK6 382 aa19.69■□□□□ 0.74
SMPD1-203ENST00000527275 SLC27A5Q9Y2P5 690 aa19.69■□□□□ 0.74
SMPD1-203ENST00000527275 MYO9BQ13459 2157 aa19.69■□□□□ 0.74
SMPD1-203ENST00000527275 ESYT3A0FGR9 886 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 GJB6O95452 261 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 GRIK1P39086 918 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 RPL34P49207 117 aaKnown RBP19.68■□□□□ 0.74
SMPD1-203ENST00000527275 ADCY1Q08828 1119 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 MAATS1Q7Z4T9 603 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 XYLT1Q86Y38 959 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 ZNF461Q8TAF7 563 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 IFT81Q8WYA0 676 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 HSFY1Q96LI6 401 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 STRIP2Q9ULQ0 834 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 GRM6O15303 877 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 TEX28O15482 410 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 CXCL14O95715 111 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 LCP1P13796 627 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 CARSP49589 748 aaKnown RBP19.68■□□□□ 0.74
SMPD1-203ENST00000527275 ERVK-21P61565 698 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 SMARCB1Q12824 385 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 DUSP4Q13115 394 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 GPR65Q8IYL9 337 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.68■□□□□ 0.74
SMPD1-203ENST00000527275 CASKIN2Q8WXE0 1202 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 NKX2-4Q9H2Z4 354 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 MSRAQ9UJ68 235 aa19.68■□□□□ 0.74
SMPD1-203ENST00000527275 TCRBV5S1A1TA0A578 114 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 TMEM191CA6NGB0 347 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 HHLA1C9JL84 531 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 CNPP09543 421 aaKnown RBP19.67■□□□□ 0.74
SMPD1-203ENST00000527275 RPL7AP62424 266 aaKnown RBP19.67■□□□□ 0.74
SMPD1-203ENST00000527275 CAMK1Q14012 370 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 SMC1AQ14683 1233 aaKnown RBP19.67■□□□□ 0.74
SMPD1-203ENST00000527275 DNAJC24Q6P3W2 148 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 VSTM1Q6UX27 236 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 GPRIN1Q7Z2K8 1008 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 SPPL2BQ8TCT7 592 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 KCTD13Q8WZ19 329 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 PIWIL1Q96J94 861 aaKnown RBP19.67■□□□□ 0.74
SMPD1-203ENST00000527275 MIS12Q9H081 205 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 ENTPD7Q9NQZ7 604 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 TLR9Q9NR96 1032 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.67■□□□□ 0.74
SMPD1-203ENST00000527275 IP6K2Q9UHH9 426 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.67■□□□□ 0.74
SMPD1-203ENST00000527275 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.67■□□□□ 0.74
SMPD1-203ENST00000527275 GOLGA8SH3BPF8 625 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 PAPSS1O43252 624 aaPredicted RBP19.67■□□□□ 0.74
SMPD1-203ENST00000527275 ABLIM3O94929 683 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 UBE3AQ05086 875 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 ADIGQ0VDE8 80 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 RAB30Q15771 203 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 DDR2Q16832 855 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 PPP2R2DQ66LE6 453 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 CHRDL2Q6WN34 429 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 SLC13A5Q86YT5 568 aaPredicted RBP19.67■□□□□ 0.74
SMPD1-203ENST00000527275 SCN4BQ8IWT1 228 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 C3orf20Q8ND61 904 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 LRRC4Q9HBW1 653 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 RXFP1Q9HBX9 757 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 FNIP2Q9P278 1114 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 NFU1Q9UMS0 254 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 SSX2IPQ9Y2D8 614 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 TRANK1O15050 2925 aa19.67■□□□□ 0.74
SMPD1-203ENST00000527275 HIDE1A8MVS5 230 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 SOAT2O75908 522 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 ACADSBP45954 432 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 NDUFV1P49821 464 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 RAB33AQ14088 237 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 ZNF268Q14587 947 aaPredicted RBP19.66■□□□□ 0.74
SMPD1-203ENST00000527275 TRADDQ15628 312 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 MGAT5BQ3V5L5 792 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 OR6B2Q6IFH4 312 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 EMBQ6PCB8 327 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 DCUN1D2Q6PH85 259 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 FAM183BPQ6ZVS7 135 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 SND1Q7KZF4 910 aaKnown RBP eCLIP19.66■□□□□ 0.743e-6■■□□□ 12.2
SMPD1-203ENST00000527275 C2orf15Q8WU43 125 aaKnown RBP19.66■□□□□ 0.74
SMPD1-203ENST00000527275 SAMD11Q96NU1 681 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 SEPT5Q99719 369 aaPredicted RBP19.66■□□□□ 0.74
SMPD1-203ENST00000527275 UBXN6Q9BZV1 441 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 VIPAS39Q9H9C1 493 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 SLC28A3Q9HAS3 691 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 CYLDQ9NQC7 956 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 IRAK3Q9Y616 596 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 ATF2P15336 505 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 MAGEA11P43364 429 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 GPR15P49685 360 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms