RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 CACNA1AO00555 2505 aa11.03□□□□□ -0.64
PRPF40B-204ENST00000527253 A0A1W2PQH9 124 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 E2F8A0AVK6 867 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 MDM4O15151 490 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 STX10O60499 249 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 ACO1P21399 889 aaKnown RBP11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 KIF11P52732 1056 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 SEC13P55735 322 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 LRRC63Q05C16 580 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 NR1H3Q13133 447 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 MORC3Q14149 939 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 SIM2Q14190 667 aaPredicted RBP11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 LY6G5CQ5SRR4 150 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 PRR23BQ6ZRT6 265 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 BBS7Q8IWZ6 715 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 UBR7Q8N806 425 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 RPLP0P6Q8NHW5 317 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 USP33Q8TEY7 942 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 DHTKD1Q96HY7 919 aaPredicted RBP11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 FAXDC2Q96IV6 333 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 HEXIM2Q96MH2 286 aaKnown RBP11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 TSG101Q99816 390 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 DUSP16Q9BY84 665 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 FBXO44Q9H4M3 255 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 CYLDQ9NQC7 956 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 NUDT5Q9UKK9 219 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 FRYLO94915 3013 aa11.02□□□□□ -0.65
PRPF40B-204ENST00000527253 SPTBN2O15020 2390 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 KIAA1549LQ6ZVL6 1849 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 TULP2O00295 520 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 BIN1O00499 593 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 SLC9A3R1O14745 358 aaPredicted RBP11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 TLR5O60602 858 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 ATG13O75143 517 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 IRF1P10914 325 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 CNR2P34972 360 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 ID4P47928 161 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 LRMPQ12912 555 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 FBXO43Q4G163 708 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 EMC10Q5UCC4 262 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 TCERG1LQ5VWI1 586 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 ARHGAP17Q68EM7 881 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 TTI2Q6NXR4 508 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 SYT13Q7L8C5 426 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 DDX42Q86XP3 938 aaKnown RBP eCLIP11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 TMEM25Q86YD3 366 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 PHTF2Q8N3S3 785 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 CCDC150Q8NCX0 1101 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 P2RY11Q96G91 374 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 TMEM176AQ96HP8 235 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 HHIPQ96QV1 700 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 PNPLA8Q9NP80 782 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 TLR8Q9NR97 1041 aaKnown RBP11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 ARMCX3Q9UH62 379 aaPredicted RBP11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 SLC8A2Q9UPR5 921 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 USP3Q9Y6I4 520 aa11.01□□□□□ -0.65
PRPF40B-204ENST00000527253 EML5Q05BV3 1969 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 A0A0A0MRY4 1105 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 PSMA7O14818 248 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 TRIM24O15164 1050 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 RETP07949 1114 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 ADH5P11766 374 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 RARGP13631 454 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 HNRNPLP14866 589 aaKnown RBP eCLIP11□□□□□ -0.65
PRPF40B-204ENST00000527253 KCNA4P22459 653 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 FMO5P49326 533 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 SPEM2Q0P670 501 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 CUL2Q13617 745 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 DMC1Q14565 340 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 C2orf27AQ580R0 203 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 LAIR1Q6GTX8 287 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 KLHL10Q6JEL2 608 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 HTR3DQ70Z44 454 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 PIGZQ86VD9 579 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 TTC30AQ86WT1 665 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 ETFBKMTQ8IXQ9 262 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 CCDC33Q8N5R6 958 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 FAM160A2Q8N612 972 aaPredicted RBP11□□□□□ -0.65
PRPF40B-204ENST00000527253 LMO3Q8TAP4 145 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 NELFBQ8WX92 580 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 NDRG1Q92597 394 aaKnown RBP11□□□□□ -0.65
PRPF40B-204ENST00000527253 KAT5Q92993 513 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 CEP63Q96MT8 703 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 GTPBP4Q9BZE4 634 aaKnown RBP11□□□□□ -0.65
PRPF40B-204ENST00000527253 UBXN6Q9BZV1 441 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11□□□□□ -0.65
PRPF40B-204ENST00000527253 TBC1D14Q9P2M4 693 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 HOOK1Q9UJC3 728 aaKnown RBP11□□□□□ -0.65
PRPF40B-204ENST00000527253 HCN2Q9UL51 889 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 SH3BP1Q9Y3L3 701 aa11□□□□□ -0.65
PRPF40B-204ENST00000527253 MYO18AQ92614 2054 aaKnown RBP11□□□□□ -0.65
PRPF40B-204ENST00000527253 DCHS1Q96JQ0 3298 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 DMXL1Q9Y485 3027 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 SPAG17Q6Q759 2223 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 CCDC163A0A0D9SF12 145 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 RNF225M0QZC1 329 aaPredicted RBP10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 HOXC11O43248 304 aaPredicted RBP10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 KAT7O95251 611 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 ADH1CP00326 375 aa10.99□□□□□ -0.65
PRPF40B-204ENST00000527253 CALCAP01258 141 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms