RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 COMTP21964 271 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 ATP5DP30049 168 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 RPS19P39019 145 aaKnown RBP5.31□□□□□ -1.56
CTR9-203ENST00000526874 BUD31P41223 144 aaPredicted RBP5.31□□□□□ -1.56
CTR9-203ENST00000526874 NPEPPSP55786 919 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 C17orf67Q0P5P2 114 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 TARDBPQ13148 414 aaKnown RBP eCLIP5.31□□□□□ -1.56
CTR9-203ENST00000526874 PPA1Q15181 289 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 FLYWCH1Q4VC44 716 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 KHDC1LQ5JSQ8 128 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 ATG16L1Q676U5 607 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 FAM111BQ6SJ93 734 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 POLNQ7Z5Q5 900 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 CCDC91Q7Z6B0 441 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 PRPF39Q86UA1 669 aaKnown RBP5.31□□□□□ -1.56
CTR9-203ENST00000526874 NLRP14Q86W24 1093 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 MICU3Q86XE3 530 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 RHOT1Q8IXI2 618 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 ELOA2Q8IYF1 753 aaPredicted RBP5.31□□□□□ -1.56
CTR9-203ENST00000526874 NUP93Q8N1F7 819 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 GALNT4Q8N4A0 578 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 SRBD1Q8N5C6 995 aaKnown RBP5.31□□□□□ -1.56
CTR9-203ENST00000526874 MB21D1Q8N884 522 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 RUFY2Q8WXA3 655 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 TRIM43Q96BQ3 446 aaPredicted RBP5.31□□□□□ -1.56
CTR9-203ENST00000526874 FAM120BQ96EK7 910 aaKnown RBP5.31□□□□□ -1.56
CTR9-203ENST00000526874 CALML4Q96GE6 196 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 ZNF764Q96H86 408 aaPredicted RBP5.31□□□□□ -1.56
CTR9-203ENST00000526874 PIGSQ96S52 555 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 PPP1R9BQ96SB3 815 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 ADOQ96SZ5 270 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 ADI1Q9BV57 179 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 TWSG1Q9GZX9 223 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 ABHD16BQ9H3Z7 469 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 GREM2Q9H772 168 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 SMURF2Q9HAU4 748 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 CYP4F11Q9HBI6 524 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 PIH1D1Q9NWS0 290 aaKnown RBP5.31□□□□□ -1.56
CTR9-203ENST00000526874 HECAQ9UBI9 543 aaPredicted RBP5.31□□□□□ -1.56
CTR9-203ENST00000526874 GTF3C4Q9UKN8 822 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 TBX20Q9UMR3 447 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 ATP6V0A2Q9Y487 856 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 PSAT1Q9Y617 370 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 SLC30A1Q9Y6M5 507 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 CAPN14A8MX76 684 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 IPO8O15397 1037 aaKnown RBP5.3□□□□□ -1.56
CTR9-203ENST00000526874 SRGAP2O75044 1071 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 ITGA10O75578 1167 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 USP1O94782 785 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 ENDOD1O94919 500 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 PRKCBP05771 671 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 SCG2P13521 617 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 HDCP19113 662 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 NNMTP40261 264 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 AARSP49588 968 aaKnown RBP eCLIP5.3□□□□□ -1.56
CTR9-203ENST00000526874 RCAN1P53805 252 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 PSMC6P62333 389 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 ADAM17P78536 824 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 MGAT2Q10469 447 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 CHAF1BQ13112 559 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 SNAPC2Q13487 334 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 ELAVL1Q15717 326 aaKnown RBP5.3□□□□□ -1.56
CTR9-203ENST00000526874 DUSP28Q4G0W2 176 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 GPR139Q6DWJ6 353 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 SHQ1Q6PI26 577 aaKnown RBP5.3□□□□□ -1.56
CTR9-203ENST00000526874 DCLRE1AQ6PJP8 1040 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 Q6ZSN1 163 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 Q6ZVL8 140 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 RNF44Q7L0R7 432 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 NUP54Q7Z3B4 507 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 CPLX4Q7Z7G2 160 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 ARHGEF25Q86VW2 580 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 XYLT1Q86Y38 959 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 CCDC117Q8IWD4 279 aaPredicted RBP5.3□□□□□ -1.56
CTR9-203ENST00000526874 TTC39CQ8N584 583 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 VGLL2Q8N8G2 317 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 MOSPD2Q8NHP6 518 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 USP6NLQ92738 828 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 FAM167AQ96KS9 214 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 MRGPRX4Q96LA9 322 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 ZNF512Q96ME7 567 aaPredicted RBP5.3□□□□□ -1.56
CTR9-203ENST00000526874 REEP2Q9BRK0 252 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 KRTAP3-1Q9BYR8 98 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 NELFAQ9H3P2 528 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 DECR2Q9NUI1 292 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 TBC1D23Q9NUY8 699 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 CLCA2Q9UQC9 943 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 NAALADL1Q9UQQ1 740 aa5.3□□□□□ -1.56
CTR9-203ENST00000526874 MTF2Q9Y483 593 aaPredicted RBP5.3□□□□□ -1.56
CTR9-203ENST00000526874 RPTORQ8N122 1335 aa5.29□□□□□ -1.56
CTR9-203ENST00000526874 SH2B2O14492 632 aaPredicted RBP5.29□□□□□ -1.56
CTR9-203ENST00000526874 AHSGP02765 367 aa5.29□□□□□ -1.56
CTR9-203ENST00000526874 ANXA1P04083 346 aa5.29□□□□□ -1.56
CTR9-203ENST00000526874 ATP5BP06576 529 aaKnown RBP5.29□□□□□ -1.56
CTR9-203ENST00000526874 LAMP2P13473 410 aa5.29□□□□□ -1.56
CTR9-203ENST00000526874 MSH2P43246 934 aa5.29□□□□□ -1.56
CTR9-203ENST00000526874 MAGEA10P43363 369 aaPredicted RBP5.29□□□□□ -1.56
CTR9-203ENST00000526874 CARSP49589 748 aaKnown RBP5.29□□□□□ -1.56
CTR9-203ENST00000526874 AP2B1P63010 937 aa5.29□□□□□ -1.56
CTR9-203ENST00000526874 UBXN2AP68543 259 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms