RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 MRPL42Q9Y6G3 142 aaKnown RBP10.27□□□□□ -0.76
USP35-201ENST00000526425 KAT6AQ92794 2004 aa10.27□□□□□ -0.76
USP35-201ENST00000526425 MYH9P35579 1960 aaKnown RBP10.27□□□□□ -0.77
USP35-201ENST00000526425 A0A1W2PQ67 120 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 LIN7AO14910 233 aaPredicted RBP10.27□□□□□ -0.77
USP35-201ENST00000526425 KIAA0391O15091 583 aaKnown RBP10.27□□□□□ -0.77
USP35-201ENST00000526425 TRAPPC3O43617 180 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 CST8O60676 142 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 MAFO75444 373 aaPredicted RBP10.27□□□□□ -0.77
USP35-201ENST00000526425 TJP3O95049 919 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 RARBP10826 455 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 LCP1P13796 627 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 DDX5P17844 614 aaKnown RBP10.27□□□□□ -0.77
USP35-201ENST00000526425 CDH6P55285 790 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 BTG3Q14201 252 aaPredicted RBP10.27□□□□□ -0.77
USP35-201ENST00000526425 FAXCQ5TGI0 409 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 TWF2Q6IBS0 349 aaKnown RBP10.27□□□□□ -0.77
USP35-201ENST00000526425 TAOK1Q7L7X3 1001 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 SLFN11Q7Z7L1 901 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 ZBED8Q8IZ13 594 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 IQCKQ8N0W5 287 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 SMYD1Q8NB12 490 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 SNF8Q96H20 258 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 MAELQ96JY0 434 aaKnown RBP10.27□□□□□ -0.77
USP35-201ENST00000526425 ACO2Q99798 780 aaKnown RBP10.27□□□□□ -0.77
USP35-201ENST00000526425 SH3GL1Q99961 368 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 SLX1AQ9BQ83 275 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 CEP44Q9C0F1 390 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 EURLQ9NYK6 297 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 CTNNAL1Q9UBT7 734 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 STXBP5LQ9Y2K9 1186 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 MANSC4A6NHS7 340 aaPredicted RBP10.27□□□□□ -0.77
USP35-201ENST00000526425 GOLGA8RI6L899 631 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 MED7O43513 233 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 ENTPD5O75356 428 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 CHN1P15882 459 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 PTDSS1P48651 473 aaKnown RBP10.27□□□□□ -0.77
USP35-201ENST00000526425 NEK2P51955 445 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 YWHAGP61981 247 aaKnown RBP eCLIP10.27□□□□□ -0.77
USP35-201ENST00000526425 CCDC110Q8TBZ0 833 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 SMC6Q96SB8 1091 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 STRA6Q9BX79 667 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 AP5M1Q9H0R1 490 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 CDT1Q9H211 546 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 TMBIM4Q9HC24 238 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 PALMDQ9NP74 551 aa10.27□□□□□ -0.77
USP35-201ENST00000526425 A8MXQ7 604 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 PRPSAP2O60256 369 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 LGALS2P05162 132 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 CYP1A2P05177 515 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 PDGFRAP16234 1089 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 RFC1P35251 1148 aaPredicted RBP10.26□□□□□ -0.77
USP35-201ENST00000526425 ARL2P36404 184 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 NSUN2Q08J23 767 aaKnown RBP eCLIP10.26□□□□□ -0.77
USP35-201ENST00000526425 SURF1Q15526 300 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 FAM110CQ1W6H9 321 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 PUS10Q3MIT2 529 aaKnown RBP10.26□□□□□ -0.77
USP35-201ENST00000526425 TRIM72Q6ZMU5 477 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 PIAS4Q8N2W9 510 aaPredicted RBP10.26□□□□□ -0.77
USP35-201ENST00000526425 C12orf29Q8N999 325 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 TMEM237Q96Q45 408 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 KLF6Q99612 283 aaPredicted RBP10.26□□□□□ -0.77
USP35-201ENST00000526425 NTPCRQ9BSD7 190 aaKnown RBP10.26□□□□□ -0.77
USP35-201ENST00000526425 CDC42EP4Q9H3Q1 356 aaKnown RBP10.26□□□□□ -0.77
USP35-201ENST00000526425 ST6GALNAC4Q9H4F1 302 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 ZFYVE28Q9HCC9 887 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 VTA1Q9NP79 307 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 MAD1L1Q9Y6D9 718 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 SPECC1L-ADORA2AF8WAN1 911 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 CNMDO75829 334 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 NOMO3P69849 1222 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 MAMLD1Q13495 774 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 NETO2Q8NC67 525 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 TTC8Q8TAM2 541 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 RUNDC3BQ96NL0 473 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 RBM15Q96T37 977 aaKnown RBP eCLIP10.26□□□□□ -0.77
USP35-201ENST00000526425 PRMT1Q99873 361 aaKnown RBP10.26□□□□□ -0.77
USP35-201ENST00000526425 CENPKQ9BS16 269 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 PABPC3Q9H361 631 aaKnown RBP10.26□□□□□ -0.77
USP35-201ENST00000526425 SNTG2Q9NY99 539 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 CROTQ9UKG9 612 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 DNPEPQ9ULA0 475 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 NOD1Q9Y239 953 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 ATP6V1C1P21283 382 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 CHKAP35790 457 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 SLC26A2P50443 739 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 PDIA2Q13087 525 aaKnown RBP10.26□□□□□ -0.77
USP35-201ENST00000526425 BYSLQ13895 437 aaKnown RBP10.26□□□□□ -0.77
USP35-201ENST00000526425 WDR49Q8IV35 697 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.26□□□□□ -0.77
USP35-201ENST00000526425 GSDMBQ8TAX9 411 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 TFAP2BQ92481 460 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 SLC35B4Q969S0 331 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 ABHD16BQ9H3Z7 469 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 ALG13Q9NP73 1137 aaKnown RBP10.26□□□□□ -0.77
USP35-201ENST00000526425 ATAD3AQ9NVI7 634 aa10.26□□□□□ -0.77
USP35-201ENST00000526425 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.25□□□□□ -0.77
USP35-201ENST00000526425 GPR25O00155 361 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 ACKR2O00590 384 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 BANF1O75531 89 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms