RNA–Protein interactions for RNA: ENST00000526258.5

KDM2A-207, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 5,671 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-207ENST00000526258 ADSSP30520 456 aa13.4□□□□□ -0.26
KDM2A-207ENST00000526258 CARTPTQ16568 116 aa13.4□□□□□ -0.26
KDM2A-207ENST00000526258 USP39Q53GS9 565 aaKnown RBP13.4□□□□□ -0.26
KDM2A-207ENST00000526258 AGKQ53H12 422 aa13.4□□□□□ -0.26
KDM2A-207ENST00000526258 SYNMO15061 1565 aa13.4□□□□□ -0.27
KDM2A-207ENST00000526258 PNMA6FA0A0J9YX94 578 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 USP17L3A6NCW0 530 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 USP17L4A6NCW7 530 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 INPP4BO15327 924 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 CTDNEP1O95476 244 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 MOCS2O96007 188 aaPredicted RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 P4HBP07237 508 aaKnown RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 CCND2P30279 289 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 LSM3P62310 102 aaKnown RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 ZNF268Q14587 947 aaPredicted RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 TSC22D1Q15714 1073 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 PKN2Q16513 984 aaKnown RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 TYW3Q6IPR3 259 aaKnown RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 USP17L1Q7RTZ2 530 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 TDRD5Q8NAT2 981 aaKnown RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 RASSF5Q8WWW0 418 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 AVENQ9NQS1 362 aaPredicted RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 CD274Q9NZQ7 290 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 SLC39A10Q9ULF5 831 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 SORCS3Q9UPU3 1222 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 TK2O00142 265 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 PIK3CDO00329 1044 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 HIST1H2AGP0C0S8 130 aaPredicted RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 BMP3P12645 472 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 HIST1H2ADP20671 130 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 PSMA3P25788 255 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 COPZ1P61923 177 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 BNIP1Q12981 228 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 SNX32Q86XE0 403 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 C8orf59Q8N0T1 100 aaPredicted RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 WDR36Q8NI36 951 aaKnown RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 HIST1H2AHQ96KK5 128 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 HIST1H2AJQ99878 128 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 H2AFJQ9BTM1 129 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 CHORDC1Q9UHD1 332 aaPredicted RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 CROTQ9UKG9 612 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 CPSF1Q10570 1443 aaKnown RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 DCXO43602 365 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 SOAT1P35610 550 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 PIGHQ14442 188 aaPredicted RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 SHROOM1Q2M3G4 852 aaPredicted RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 EFL1Q7Z2Z2 1120 aaKnown RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 ERO1BQ86YB8 467 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 FAM71DQ8N9W8 422 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 TAMM41Q96BW9 452 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 DYNLL2Q96FJ2 89 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 DNAJC1Q96KC8 554 aaKnown RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 SPON2Q9BUD6 331 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 CRNNQ9UBG3 495 aaPredicted RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 PTPN7P35236 360 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 OLR1P78380 273 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 NFX1Q12986 1120 aaKnown RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 AUHQ13825 339 aaKnown RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 SYDE2Q5VT97 1194 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 TAF8Q7Z7C8 310 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 ULK2Q8IYT8 1036 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 ATG16L2Q8NAA4 619 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 SIPA1Q96FS4 1042 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 NINJ2Q9NZG7 142 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 CSADQ9Y600 493 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 PLXNC1O60486 1568 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 ARPC4-TTLL3A0A0A6YYG9 625 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 A0A0A6YYK5 440 aaPredicted RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 H3BNX3 289 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 SLC1A6P48664 564 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 CENPAP49450 140 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 PKNOX1P55347 436 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 ITGA1P56199 1179 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 SMU1Q2TAY7 513 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 FAM98BQ52LJ0 330 aaKnown RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 KRT74Q7RTS7 529 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 SATL1Q86VE3 508 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 TTC30AQ86WT1 665 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 CENPLQ8N0S6 344 aaPredicted RBP13.39□□□□□ -0.27
KDM2A-207ENST00000526258 MIER2Q8N344 545 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 LRRC17Q8N6Y2 441 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 APOPT1Q96IL0 206 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 NUDT12Q9BQG2 462 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 PKP3Q9Y446 797 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 SQORQ9Y6N5 450 aa13.39□□□□□ -0.27
KDM2A-207ENST00000526258 GAS2O43903 313 aaKnown RBP13.38□□□□□ -0.27
KDM2A-207ENST00000526258 NADKO95544 446 aaPredicted RBP13.38□□□□□ -0.27
KDM2A-207ENST00000526258 SCARA3Q6AZY7 606 aa13.38□□□□□ -0.27
KDM2A-207ENST00000526258 PRR23CQ6ZRP0 262 aa13.38□□□□□ -0.27
KDM2A-207ENST00000526258 ZHX1-C8orf76Q96EF9 292 aa13.38□□□□□ -0.27
KDM2A-207ENST00000526258 KCTD14Q9BQ13 255 aaPredicted RBP13.38□□□□□ -0.27
KDM2A-207ENST00000526258 KIFC1Q9BW19 673 aa13.38□□□□□ -0.27
KDM2A-207ENST00000526258 GTF3C4Q9UKN8 822 aa13.38□□□□□ -0.27
KDM2A-207ENST00000526258 NR5A2O00482 541 aa13.38□□□□□ -0.27
KDM2A-207ENST00000526258 EPN2O95208 641 aa13.38□□□□□ -0.27
KDM2A-207ENST00000526258 CPA3P15088 417 aa13.38□□□□□ -0.27
KDM2A-207ENST00000526258 TIMM50Q3ZCQ8 353 aa13.38□□□□□ -0.27
KDM2A-207ENST00000526258 C5orf22Q49AR2 442 aa13.38□□□□□ -0.27
KDM2A-207ENST00000526258 RNF219Q5W0B1 726 aaPredicted RBP13.38□□□□□ -0.27
KDM2A-207ENST00000526258 GADL1Q6ZQY3 521 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms