RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 OBP2AQ9NY56 170 aa21.81■■□□□ 1.08
CD44-222ENST00000526025 KIF26AQ9ULI4 1882 aaPredicted RBP21.8■■□□□ 1.08
CD44-222ENST00000526025 TRAV19A0A0A6YYK7 116 aa21.8■■□□□ 1.08
CD44-222ENST00000526025 MFAP3LO75121 409 aa21.8■■□□□ 1.08
CD44-222ENST00000526025 SERPING1P05155 500 aa21.8■■□□□ 1.08
CD44-222ENST00000526025 GABRB2P47870 512 aa21.8■■□□□ 1.08
CD44-222ENST00000526025 CENPCQ03188 943 aa21.8■■□□□ 1.08
CD44-222ENST00000526025 HECTD3Q5T447 861 aa21.8■■□□□ 1.08
CD44-222ENST00000526025 STXBP5Q5T5C0 1151 aa21.8■■□□□ 1.08
CD44-222ENST00000526025 HGSNATQ68CP4 663 aa21.8■■□□□ 1.08
CD44-222ENST00000526025 TXNDC8Q6A555 127 aa21.8■■□□□ 1.08
CD44-222ENST00000526025 POTEHQ6S545 545 aa21.8■■□□□ 1.08
CD44-222ENST00000526025 SCD5Q86SK9 330 aa21.8■■□□□ 1.08
CD44-222ENST00000526025 TADA2BQ86TJ2 420 aa21.8■■□□□ 1.08
CD44-222ENST00000526025 CMTM8Q8IZV2 173 aa21.8■■□□□ 1.08
CD44-222ENST00000526025 ZSCAN18Q8TBC5 510 aaPredicted RBP21.8■■□□□ 1.08
CD44-222ENST00000526025 ZSWIM3Q96MP5 696 aa21.8■■□□□ 1.08
CD44-222ENST00000526025 CPXM1Q96SM3 734 aa21.8■■□□□ 1.08
CD44-222ENST00000526025 TRIM62Q9BVG3 475 aa21.8■■□□□ 1.08
CD44-222ENST00000526025 SLITRK6Q9H5Y7 841 aa21.8■■□□□ 1.08
CD44-222ENST00000526025 HAUS4Q9H6D7 363 aa21.8■■□□□ 1.08
CD44-222ENST00000526025 IGSF9Q9P2J2 1179 aa21.8■■□□□ 1.08
CD44-222ENST00000526025 CHORDC1Q9UHD1 332 aaPredicted RBP21.8■■□□□ 1.08
CD44-222ENST00000526025 E5RJQ4 531 aa21.79■■□□□ 1.08
CD44-222ENST00000526025 UNGP13051 313 aaPredicted RBP21.79■■□□□ 1.08
CD44-222ENST00000526025 LCP1P13796 627 aa21.79■■□□□ 1.08
CD44-222ENST00000526025 TCF3P15923 654 aa21.79■■□□□ 1.08
CD44-222ENST00000526025 HTR4Q13639 388 aa21.79■■□□□ 1.08
CD44-222ENST00000526025 CLEC16AQ2KHT3 1053 aa21.79■■□□□ 1.08
CD44-222ENST00000526025 PTPN20Q4JDL3 420 aa21.79■■□□□ 1.08
CD44-222ENST00000526025 FAM78AQ5JUQ0 283 aa21.79■■□□□ 1.08
CD44-222ENST00000526025 BEND5Q7L4P6 421 aa21.79■■□□□ 1.08
CD44-222ENST00000526025 MAB21L3Q8N8X9 362 aa21.79■■□□□ 1.08
CD44-222ENST00000526025 OLIG1Q8TAK6 271 aa21.79■■□□□ 1.08
CD44-222ENST00000526025 KIF9Q9HAQ2 790 aa21.79■■□□□ 1.08
CD44-222ENST00000526025 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.79■■□□□ 1.08
CD44-222ENST00000526025 A0A1W2PQH9 124 aa21.78■■□□□ 1.08
CD44-222ENST00000526025 PAPSS1O43252 624 aaPredicted RBP21.78■■□□□ 1.08
CD44-222ENST00000526025 TLR5O60602 858 aa21.78■■□□□ 1.08
CD44-222ENST00000526025 ECI2O75521 394 aa21.78■■□□□ 1.08
CD44-222ENST00000526025 GLI1P08151 1106 aa21.78■■□□□ 1.08
CD44-222ENST00000526025 RALAP11233 206 aa21.78■■□□□ 1.08
CD44-222ENST00000526025 SCNN1AP37088 669 aa21.78■■□□□ 1.08
CD44-222ENST00000526025 AVPR1AP37288 418 aa21.78■■□□□ 1.08
CD44-222ENST00000526025 YWHAGP61981 247 aaKnown RBP eCLIP21.78■■□□□ 1.08
CD44-222ENST00000526025 SLC7A9P82251 487 aa21.78■■□□□ 1.08
CD44-222ENST00000526025 TSR1Q2NL82 804 aaKnown RBP21.78■■□□□ 1.08
CD44-222ENST00000526025 NAA35Q5VZE5 725 aa21.78■■□□□ 1.08
CD44-222ENST00000526025 ZNF571Q7Z3V5 609 aaPredicted RBP21.78■■□□□ 1.08
CD44-222ENST00000526025 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.78■■□□□ 1.08
CD44-222ENST00000526025 ERICH1Q86X53 443 aa21.78■■□□□ 1.08
CD44-222ENST00000526025 PHF13Q86YI8 300 aaPredicted RBP21.78■■□□□ 1.08
CD44-222ENST00000526025 KIAA1958Q8N8K9 716 aa21.78■■□□□ 1.08
CD44-222ENST00000526025 ADAMTS19Q8TE59 1207 aa21.78■■□□□ 1.08
CD44-222ENST00000526025 ELSPBP1Q96BH3 223 aa21.78■■□□□ 1.08
CD44-222ENST00000526025 PCDHB18PQ96TA0 734 aa21.78■■□□□ 1.08
CD44-222ENST00000526025 NMUR1Q9HB89 426 aa21.78■■□□□ 1.08
CD44-222ENST00000526025 ABHD10Q9NUJ1 306 aa21.78■■□□□ 1.08
CD44-222ENST00000526025 ASNSD1Q9NWL6 643 aa21.78■■□□□ 1.08
CD44-222ENST00000526025 NAGPAQ9UK23 515 aa21.78■■□□□ 1.08
CD44-222ENST00000526025 ARHGAP26Q9UNA1 814 aa21.78■■□□□ 1.08
CD44-222ENST00000526025 C2orf78A6NCI8 922 aa21.77■■□□□ 1.08
CD44-222ENST00000526025 YJEFN3A6XGL0 299 aa21.77■■□□□ 1.08
CD44-222ENST00000526025 AKR1B15C9JRZ8 316 aaPredicted RBP21.77■■□□□ 1.08
CD44-222ENST00000526025 E7ENQ6 273 aa21.77■■□□□ 1.08
CD44-222ENST00000526025 GZMAP12544 262 aa21.77■■□□□ 1.08
CD44-222ENST00000526025 HDCP19113 662 aa21.77■■□□□ 1.08
CD44-222ENST00000526025 TNFAIP3P21580 790 aa21.77■■□□□ 1.08
CD44-222ENST00000526025 MMP8P22894 467 aa21.77■■□□□ 1.08
CD44-222ENST00000526025 SP100P23497 879 aaPredicted RBP21.77■■□□□ 1.08
CD44-222ENST00000526025 FCARP24071 287 aa21.77■■□□□ 1.08
CD44-222ENST00000526025 VPS36Q86VN1 386 aa21.77■■□□□ 1.08
CD44-222ENST00000526025 GPIHBP1Q8IV16 184 aa21.77■■□□□ 1.08
CD44-222ENST00000526025 ARID3BQ8IVW6 561 aaPredicted RBP21.77■■□□□ 1.08
CD44-222ENST00000526025 SCUBE3Q8IX30 993 aa21.77■■□□□ 1.08
CD44-222ENST00000526025 GOLGA1Q92805 767 aa21.77■■□□□ 1.08
CD44-222ENST00000526025 C18orf8Q96DM3 657 aa21.77■■□□□ 1.08
CD44-222ENST00000526025 SYNCQ9H7C4 482 aa21.77■■□□□ 1.08
CD44-222ENST00000526025 ZFP14Q9HCL3 533 aa21.77■■□□□ 1.08
CD44-222ENST00000526025 TRPC7Q9HCX4 862 aa21.77■■□□□ 1.08
CD44-222ENST00000526025 ABCC13Q9NSE7 274 aa21.77■■□□□ 1.08
CD44-222ENST00000526025 OLA1Q9NTK5 396 aaKnown RBP21.77■■□□□ 1.08
CD44-222ENST00000526025 ZNHIT6Q9NWK9 470 aaKnown RBP21.77■■□□□ 1.08
CD44-222ENST00000526025 OSER1Q9NX31 292 aa21.77■■□□□ 1.08
CD44-222ENST00000526025 GOLGA6L3A6NEY3 463 aa21.76■■□□□ 1.07
CD44-222ENST00000526025 ADCY5O95622 1261 aa21.76■■□□□ 1.07
CD44-222ENST00000526025 ABL1P00519 1130 aa21.76■■□□□ 1.07
CD44-222ENST00000526025 LTFP02788 710 aa21.76■■□□□ 1.07
CD44-222ENST00000526025 ERBB2P04626 1255 aa21.76■■□□□ 1.07
CD44-222ENST00000526025 CKMP06732 381 aa21.76■■□□□ 1.07
CD44-222ENST00000526025 RARGP13631 454 aa21.76■■□□□ 1.07
CD44-222ENST00000526025 NSFP46459 744 aaKnown RBP21.76■■□□□ 1.07
CD44-222ENST00000526025 PGFP49763 221 aa21.76■■□□□ 1.07
CD44-222ENST00000526025 GSCP56915 257 aaPredicted RBP21.76■■□□□ 1.07
CD44-222ENST00000526025 CDK17Q00537 523 aa21.76■■□□□ 1.07
CD44-222ENST00000526025 TDRD12Q587J7 1177 aaKnown RBP21.76■■□□□ 1.07
CD44-222ENST00000526025 BSPRYQ5W0U4 402 aa21.76■■□□□ 1.07
CD44-222ENST00000526025 TOGARAM2Q6ZUX3 1019 aa21.76■■□□□ 1.07
CD44-222ENST00000526025 GJD3Q8N144 294 aa21.76■■□□□ 1.07
CD44-222ENST00000526025 CELF5Q8N6W0 485 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms