RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 ANKRD30AQ9BXX3 1397 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 NCOA1Q15788 1441 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 ABCC3O15438 1527 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 UNC13BO14795 1591 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 CAMSAP1Q5T5Y3 1602 aa4.61□□□□□ -1.67
CD44-219ENST00000525685 RASA4BC9J798 803 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 RASA4O43374 803 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 PROM1O43490 865 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 TXNP10599 105 aaKnown RBP4.6□□□□□ -1.67
CD44-219ENST00000525685 IDEP14735 1019 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 ACVR2AP27037 513 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 IL1R2P27930 398 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 PTDSS1P48651 473 aaKnown RBP4.6□□□□□ -1.67
CD44-219ENST00000525685 CASP5P51878 434 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 MAPK10P53779 464 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 NXPH1P58417 271 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 RHBDL3P58872 404 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 BTKQ06187 659 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 KRTAP1-1Q07627 177 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 MYO1EQ12965 1108 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 STK3Q13188 491 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 DEPDC1Q5TB30 811 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 VPS53Q5VIR6 699 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 TMPRSS9Q7Z410 1059 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 MORC1Q86VD1 984 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 GAS2L3Q86XJ1 694 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 LPIN2Q92539 896 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 ZNF566Q969W8 418 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 PGBD1Q96JS3 809 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 MSLNLQ96KJ4 702 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 MESP1Q9BRJ9 268 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 AMBRA1Q9C0C7 1298 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 ZNF700Q9H0M5 742 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 CHST12Q9NRB3 414 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 ADARB2Q9NS39 739 aaKnown RBP4.6□□□□□ -1.67
CD44-219ENST00000525685 SLC52A1Q9NWF4 448 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 PADI4Q9UM07 663 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.6□□□□□ -1.67
CD44-219ENST00000525685 DAAM1Q9Y4D1 1078 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 ROCK1Q13464 1354 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 CNTLNQ9NXG0 1405 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 VWDEQ8N2E2 1590 aa4.6□□□□□ -1.67
CD44-219ENST00000525685 PPM1DO15297 605 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 SRGAP2O75044 1071 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 PIAS2O75928 621 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 C1RP00736 705 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 YY1P25490 414 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 PPIFP30405 207 aaKnown RBP4.59□□□□□ -1.67
CD44-219ENST00000525685 MTHFSP49914 203 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 CPT1AP50416 773 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 PDE6CP51160 858 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 DGKEP52429 567 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 PDE1AP54750 535 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 NHLH1Q02575 133 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 TBCCQ15814 346 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 TEDDM1Q5T9Z0 273 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 KAZNQ674X7 775 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 FBXO38Q6PIJ6 1188 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 C1orf228Q6PIY5 440 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 SKAP1Q86WV1 359 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 OR2C3Q8N628 320 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 SAMD3Q8N6K7 520 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 MYO3AQ8NEV4 1616 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 PREX1Q8TCU6 1659 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 OSCP1Q8WVF1 389 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 GJA10Q969M2 543 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 FKBP10Q96AY3 582 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 RPS6KC1Q96S38 1066 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 DPCDQ9BVM2 203 aaPredicted RBP4.59□□□□□ -1.67
CD44-219ENST00000525685 MAGEB5Q9BZ81 275 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 KLK15Q9H2R5 256 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 GLOD4Q9HC38 313 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 GBA2Q9HCG7 927 aaPredicted RBP4.59□□□□□ -1.67
CD44-219ENST00000525685 RRP7BPQ9NSQ0 103 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 SLC17A6Q9P2U8 582 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 ANKRD50Q9ULJ7 1429 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 LRCH1Q9Y2L9 728 aa4.59□□□□□ -1.67
CD44-219ENST00000525685 LMTK2Q8IWU2 1503 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 PZPP20742 1482 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 LRRC3CA6NJW4 275 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 AQP7P3A6NL99 342 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 PSMD9O00233 223 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 CCP110O43303 1012 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 NCK2O43639 380 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 TLR5O60602 858 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 PDHA1P08559 390 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 NR2F6P10588 404 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 HARSP12081 509 aaKnown RBP4.58□□□□□ -1.68
CD44-219ENST00000525685 MYL4P12829 197 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 BTF3P20290 206 aaKnown RBP4.58□□□□□ -1.68
CD44-219ENST00000525685 ALDH9A1P49189 494 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 ALDH5A1P51649 535 aaPredicted RBP4.58□□□□□ -1.68
CD44-219ENST00000525685 IZUMO3Q5VZ72 239 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 HIBCHQ6NVY1 386 aaPredicted RBP4.58□□□□□ -1.68
CD44-219ENST00000525685 GGT6Q6P531 493 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 ARHGEF25Q86VW2 580 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 DNAJB14Q8TBM8 379 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 MYCBPAPQ8TBZ2 947 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 TMEM171Q8WVE6 324 aa4.58□□□□□ -1.68
CD44-219ENST00000525685 XAGE5Q8WWM1 108 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms