RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 RIF1Q5UIP0 2472 aaKnown RBP19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 RNF225M0QZC1 329 aaPredicted RBP19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 TULP2O00295 520 aa19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 O00370 1275 aa19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 NFATC1O95644 943 aa19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 TBX18O95935 607 aa19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 PAEPP09466 180 aa19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 MTIF2P46199 727 aaKnown RBP19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 SLC8A3P57103 927 aa19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 AMPD2Q01433 879 aa19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 PDE4CQ08493 712 aa19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 CCINQ13939 588 aa19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 DGKKQ5KSL6 1271 aa19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 NAIF1Q69YI7 327 aaPredicted RBP19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 MAMSTRQ6ZN01 415 aa19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 Q6ZS52 159 aa19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 SCD5Q86SK9 330 aa19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 RBBP8NLQ8NC74 664 aaPredicted RBP19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 TFAP2BQ92481 460 aa19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 NKD2Q969F2 451 aaPredicted RBP19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 CRACR2AQ9BSW2 395 aa19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 HESX1Q9UBX0 185 aa19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 FBXO4Q9UKT5 387 aa19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 KIAA1257Q9ULG3 409 aa19.49■□□□□ 0.71
TSPAN4-215ENST00000525334 VPS13AQ96RL7 3174 aa19.48■□□□□ 0.71
TSPAN4-215ENST00000525334 PTPRZ1P23471 2315 aaPredicted RBP19.48■□□□□ 0.71
TSPAN4-215ENST00000525334 TRDMT1O14717 391 aaKnown RBP19.48■□□□□ 0.71
TSPAN4-215ENST00000525334 XPO1O14980 1071 aaKnown RBP19.48■□□□□ 0.71
TSPAN4-215ENST00000525334 ZNF132P52740 706 aa19.48■□□□□ 0.71
TSPAN4-215ENST00000525334 CSTF1Q05048 431 aaKnown RBP19.48■□□□□ 0.71
TSPAN4-215ENST00000525334 BST2Q10589 180 aaKnown RBP19.48■□□□□ 0.71
TSPAN4-215ENST00000525334 GAS6Q14393 721 aa19.48■□□□□ 0.71
TSPAN4-215ENST00000525334 TMEM196Q5HYL7 178 aa19.48■□□□□ 0.71
TSPAN4-215ENST00000525334 RAB41Q5JT25 222 aa19.48■□□□□ 0.71
TSPAN4-215ENST00000525334 FSTL4Q6MZW2 842 aa19.48■□□□□ 0.71
TSPAN4-215ENST00000525334 RBM43Q6ZSC3 357 aaKnown RBP19.48■□□□□ 0.71
TSPAN4-215ENST00000525334 ASCL5Q7RTU5 278 aa19.48■□□□□ 0.71
TSPAN4-215ENST00000525334 UBA3Q8TBC4 463 aa19.48■□□□□ 0.71
TSPAN4-215ENST00000525334 ZSWIM1Q9BR11 485 aa19.48■□□□□ 0.71
TSPAN4-215ENST00000525334 PRMT8Q9NR22 394 aaPredicted RBP19.48■□□□□ 0.71
TSPAN4-215ENST00000525334 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.48■□□□□ 0.71
TSPAN4-215ENST00000525334 NAGPAQ9UK23 515 aa19.48■□□□□ 0.71
TSPAN4-215ENST00000525334 E2F8A0AVK6 867 aa19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 PRR23AA6NEV1 266 aa19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 SLC9A3R1O14745 358 aaPredicted RBP19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 CALCAP01258 141 aa19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 CYP17A1P05093 508 aa19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 IRF1P10914 325 aa19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 RARGP13631 454 aa19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 BRD2P25440 801 aaKnown RBP19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 ATP5C1P36542 298 aaKnown RBP19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 PSEN1P49768 467 aa19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 GRSF1Q12849 480 aaKnown RBP eCLIP19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 NR1H3Q13133 447 aa19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 ZNF528Q3MIS6 628 aa19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 HSP90AA4PQ58FG1 418 aa19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 TRIM65Q6PJ69 517 aa19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 LCLAT1Q6UWP7 414 aa19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 FAM114A1Q8IWE2 563 aa19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 WBP2Q969T9 261 aa19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 P2RY13Q9BPV8 354 aa19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 SEMA4AQ9H3S1 761 aa19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 FBRSL1Q9HCM7 1045 aaKnown RBP19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 UBE2TQ9NPD8 197 aaPredicted RBP19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 NUDT5Q9UKK9 219 aa19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 SH3BP1Q9Y3L3 701 aa19.47■□□□□ 0.71
TSPAN4-215ENST00000525334 SETSIPP0DME0 302 aa19.46■□□□□ 0.71
TSPAN4-215ENST00000525334 SLC9A1P19634 815 aa19.46■□□□□ 0.71
TSPAN4-215ENST00000525334 PLA2G4AP47712 749 aa19.46■□□□□ 0.71
TSPAN4-215ENST00000525334 GALK1P51570 392 aa19.46■□□□□ 0.71
TSPAN4-215ENST00000525334 TKTL1P51854 596 aa19.46■□□□□ 0.71
TSPAN4-215ENST00000525334 MAN2A1Q16706 1144 aa19.46■□□□□ 0.71
TSPAN4-215ENST00000525334 PKDCCQ504Y2 493 aa19.46■□□□□ 0.71
TSPAN4-215ENST00000525334 CT47A1Q5JQC4 288 aaPredicted RBP19.46■□□□□ 0.71
TSPAN4-215ENST00000525334 GJB7Q6PEY0 223 aa19.46■□□□□ 0.71
TSPAN4-215ENST00000525334 TSSK4Q6SA08 328 aa19.46■□□□□ 0.71
TSPAN4-215ENST00000525334 GBP6Q6ZN66 633 aa19.46■□□□□ 0.71
TSPAN4-215ENST00000525334 ADGRG2Q8IZP9 1017 aa19.46■□□□□ 0.71
TSPAN4-215ENST00000525334 KLF16Q9BXK1 252 aaPredicted RBP19.46■□□□□ 0.71
TSPAN4-215ENST00000525334 CLIC5Q9NZA1 410 aa19.46■□□□□ 0.71
TSPAN4-215ENST00000525334 TBC1D14Q9P2M4 693 aa19.46■□□□□ 0.71
TSPAN4-215ENST00000525334 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.46■□□□□ 0.71
TSPAN4-215ENST00000525334 CNTN6Q9UQ52 1028 aa19.46■□□□□ 0.71
TSPAN4-215ENST00000525334 R4GN57 208 aa19.46■□□□□ 0.71
TSPAN4-215ENST00000525334 GTPBP10A4D1E9 387 aaKnown RBP19.45■□□□□ 0.7
TSPAN4-215ENST00000525334 MDM4O15151 490 aa19.45■□□□□ 0.7
TSPAN4-215ENST00000525334 EGFP01133 1207 aa19.45■□□□□ 0.7
TSPAN4-215ENST00000525334 CCR3P51677 355 aa19.45■□□□□ 0.7
TSPAN4-215ENST00000525334 APBA1Q02410 837 aa19.45■□□□□ 0.7
TSPAN4-215ENST00000525334 DHCR24Q15392 516 aa19.45■□□□□ 0.7
TSPAN4-215ENST00000525334 CNGA2Q16280 664 aa19.45■□□□□ 0.7
TSPAN4-215ENST00000525334 EXOC3L4Q17RC7 722 aa19.45■□□□□ 0.7
TSPAN4-215ENST00000525334 GAB4Q2WGN9 574 aa19.45■□□□□ 0.7
TSPAN4-215ENST00000525334 C10orf120Q5SQS8 335 aa19.45■□□□□ 0.7
TSPAN4-215ENST00000525334 KLHDC10Q6PID8 442 aa19.45■□□□□ 0.7
TSPAN4-215ENST00000525334 SYNPOQ8N3V7 929 aa19.45■□□□□ 0.7
TSPAN4-215ENST00000525334 SPEM1Q8N4L4 309 aa19.45■□□□□ 0.7
TSPAN4-215ENST00000525334 CD101Q93033 1021 aa19.45■□□□□ 0.7
TSPAN4-215ENST00000525334 EXOC4Q96A65 974 aa19.45■□□□□ 0.7
TSPAN4-215ENST00000525334 ULBP1Q9BZM6 244 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms