RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 ADAMTS5Q9UNA0 930 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 POLHQ9Y253 713 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 CLTCL1P53675 1640 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 FMN2Q9NZ56 1722 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 USP19O94966 1318 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 ALS2Q96Q42 1657 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 NSD3Q9BZ95 1437 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 LY6G6EA0A0G2JKS1 128 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 A1L4Q6 167 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 H7C1Q1 480 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 SMIM22K7EJ46 135 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 FCHO1O14526 889 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 ARIH2O95376 493 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 ONECUT2O95948 504 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 RPLP2P05387 115 aaKnown RBP2.19□□□□□ -2.06
CD44-212ENST00000524922 NDUFB7P17568 137 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 ARFIP2P53365 341 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 LOXL3P58215 753 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 EVA1CP58658 441 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 LILRA4P59901 499 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 HTRA4P83105 476 aaPredicted RBP2.19□□□□□ -2.06
CD44-212ENST00000524922 ITKQ08881 620 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 LAMB3Q13751 1172 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 SLC15A2Q16348 729 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 PTPN21Q16825 1174 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 Q4G0T1 1027 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 RNASE12Q5GAN4 147 aaKnown RBP2.19□□□□□ -2.06
CD44-212ENST00000524922 TMEM240Q5SV17 173 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 TEDDM1Q5T9Z0 273 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 SLC9A4Q6AI14 798 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 ZNF804AQ7Z570 1209 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 TCP11L2Q8N4U5 519 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 FANCBQ8NB91 859 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.19□□□□□ -2.06
CD44-212ENST00000524922 SOCS4Q8WXH5 440 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 DDX17Q92841 729 aaKnown RBP2.19□□□□□ -2.06
CD44-212ENST00000524922 GLG1Q92896 1179 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 MTMR8Q96EF0 704 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 MRGPRX1Q96LB2 322 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 C5orf34Q96MH7 638 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 MESP1Q9BRJ9 268 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 GTPBP4Q9BZE4 634 aaKnown RBP2.19□□□□□ -2.06
CD44-212ENST00000524922 SIK2Q9H0K1 926 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 VPS16Q9H269 839 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 SLAMF7Q9NQ25 335 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 PDGFCQ9NRA1 345 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 LMBRD1Q9NUN5 540 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 ASIC5Q9NY37 505 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 AFG3L2Q9Y4W6 797 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 LRP12Q9Y561 859 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 PCDHA1Q9Y5I3 950 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 POLR3AO14802 1390 aaPredicted RBP2.19□□□□□ -2.06
CD44-212ENST00000524922 GPRASP1Q5JY77 1395 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 KIAA0232Q92628 1395 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 CRYBG1Q9Y4K1 1723 aa2.19□□□□□ -2.06
CD44-212ENST00000524922 E9PCH4 1651 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 MYOM1P52179 1685 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 LMO7Q8WWI1 1683 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 CRB1P82279 1406 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 YTHDC2Q9H6S0 1430 aaKnown RBP2.18□□□□□ -2.06
CD44-212ENST00000524922 TRPM3Q9HCF6 1732 aaPredicted RBP2.18□□□□□ -2.06
CD44-212ENST00000524922 ALDH2P05091 517 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 ATXN1LP0C7T5 689 aaKnown RBP2.18□□□□□ -2.06
CD44-212ENST00000524922 CYP2A6P11509 494 aaPredicted RBP2.18□□□□□ -2.06
CD44-212ENST00000524922 ENGP17813 658 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 ATP5F1P24539 256 aaPredicted RBP2.18□□□□□ -2.06
CD44-212ENST00000524922 FPR3P25089 353 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 SMARCA1P28370 1054 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 CCKBRP32239 447 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 THBS4P35443 961 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 VIPR2P41587 438 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 ALDH9A1P49189 494 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 SRSF1Q07955 248 aaKnown RBP eCLIP2.18□□□□□ -2.06
CD44-212ENST00000524922 LONRF3Q496Y0 759 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 KLHL22Q53GT1 634 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 PCID2Q5JVF3 399 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 SFRP4Q6FHJ7 346 aaPredicted RBP2.18□□□□□ -2.06
CD44-212ENST00000524922 NAPRTQ6XQN6 538 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 TRIM72Q6ZMU5 477 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 PARS2Q7L3T8 475 aaKnown RBP2.18□□□□□ -2.06
CD44-212ENST00000524922 CATIPQ7Z7H3 387 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 ZNF280BQ86YH2 543 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 SAMD14Q8IZD0 417 aaPredicted RBP2.18□□□□□ -2.06
CD44-212ENST00000524922 CPA6Q8N4T0 437 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 PNLDC1Q8NA58 520 aaKnown RBP2.18□□□□□ -2.06
CD44-212ENST00000524922 DENND1AQ8TEH3 1009 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 R3HDM4Q96D70 268 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 VCPIP1Q96JH7 1222 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 FAM167AQ96KS9 214 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 ASB2Q96Q27 587 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 SNX18Q96RF0 628 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 TTYH3Q9C0H2 523 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 SLC12A5Q9H2X9 1139 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 CXorf36Q9H7Y0 433 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 TCF7L1Q9HCS4 588 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 NRIP3Q9NQ35 241 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 ANLNQ9NQW6 1124 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 STK32BQ9NY57 414 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 TUBA8Q9NY65 449 aaPredicted RBP2.18□□□□□ -2.06
CD44-212ENST00000524922 NDRG4Q9ULP0 352 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms