RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 VEGFBP49765 207 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 PSEN1P49768 467 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 RGS4P49798 205 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 DNMT3LQ9UJW3 386 aa17.67■□□□□ 0.42
BEST1-203ENST00000524877 LYPLA2O95372 231 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 CCND3P30281 292 aaPredicted RBP17.66■□□□□ 0.42
BEST1-203ENST00000524877 FDFT1P37268 417 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 TUSC3Q13454 348 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 SZRD1Q7Z422 152 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 SAPCD2Q86UD0 394 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 CCDC197Q8NCU1 140 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 ARNTL2Q8WYA1 636 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 TATDN2Q93075 761 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 TSEN34Q9BSV6 310 aaKnown RBP17.66■□□□□ 0.42
BEST1-203ENST00000524877 TRIM45Q9H8W5 580 aaPredicted RBP17.66■□□□□ 0.42
BEST1-203ENST00000524877 ZNF112Q9UJU3 913 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 KCNA2P16389 499 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 CENPCQ03188 943 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 BYSLQ13895 437 aaKnown RBP17.66■□□□□ 0.42
BEST1-203ENST00000524877 SLC44A4Q53GD3 710 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 AAR2Q9Y312 384 aaKnown RBP17.66■□□□□ 0.42
BEST1-203ENST00000524877 NFICP08651 508 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 RFC2P35250 354 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 GRB14Q14449 540 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 CLEC16AQ2KHT3 1053 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 SUSD6Q92537 303 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 BLOC1S4Q9NUP1 217 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 RNF135Q8IUD6 432 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 LGI2Q8N0V4 545 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 DACT3Q96B18 629 aaPredicted RBP17.66■□□□□ 0.42
BEST1-203ENST00000524877 RIPOR3Q96MK2 946 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 C11orf84Q9BUA3 381 aaPredicted RBP17.66■□□□□ 0.42
BEST1-203ENST00000524877 TRMT13Q9NUP7 481 aaKnown RBP17.66■□□□□ 0.42
BEST1-203ENST00000524877 GTSE1Q9NYZ3 720 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 XPO7Q9UIA9 1087 aaKnown RBP17.66■□□□□ 0.42
BEST1-203ENST00000524877 CD44P16070 742 aaKnown RBP17.66■□□□□ 0.42
BEST1-203ENST00000524877 GCNT1Q02742 428 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 SLC45A4Q5BKX6 768 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 DENND5BQ6ZUT9 1274 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 TMEM161BQ8NDZ6 487 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 DNAJC18Q9H819 358 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 SUN2Q9UH99 717 aa17.66■□□□□ 0.42
BEST1-203ENST00000524877 TBC1D3BA6NDS4 549 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 PYGLP06737 847 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 NCKAP1LP55160 1127 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 C16orf87Q6PH81 154 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 ANGPTL8Q6UXH0 198 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 CNOT10Q9H9A5 744 aaKnown RBP17.65■□□□□ 0.42
BEST1-203ENST00000524877 ARHGEF9O43307 516 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 TTC4O95801 387 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 YWHAZP63104 245 aaKnown RBP17.65■□□□□ 0.42
BEST1-203ENST00000524877 LBRQ14739 615 aaKnown RBP17.65■□□□□ 0.42
BEST1-203ENST00000524877 TBCCQ15814 346 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 ATAT1Q5SQI0 421 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 KIAA0895Q8NCT3 520 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 ELMO2Q96JJ3 720 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 ADGRE3Q9BY15 652 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 DDX47Q9H0S4 455 aaKnown RBP17.65■□□□□ 0.42
BEST1-203ENST00000524877 SMAPO00193 183 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 SEC31AO94979 1220 aaKnown RBP17.65■□□□□ 0.42
BEST1-203ENST00000524877 KIF19Q2TAC6 998 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 C7orf43Q8WVR3 580 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 CERS4Q9HA82 394 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 CTIFO43310 598 aaKnown RBP17.65■□□□□ 0.42
BEST1-203ENST00000524877 PPP1R11O60927 126 aaPredicted RBP17.65■□□□□ 0.42
BEST1-203ENST00000524877 SERPIND1P05546 499 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 ACRP10323 421 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 NEK2P51955 445 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 AARS2Q5JTZ9 985 aaKnown RBP17.65■□□□□ 0.42
BEST1-203ENST00000524877 ALS2CLQ60I27 953 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 NUGGCQ68CJ6 796 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 HIBCHQ6NVY1 386 aaPredicted RBP17.65■□□□□ 0.42
BEST1-203ENST00000524877 ANO5Q75V66 913 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 CNTNAP1P78357 1384 aa17.65■□□□□ 0.42
BEST1-203ENST00000524877 ARHGAP10A1A4S6 786 aa17.64■□□□□ 0.42
BEST1-203ENST00000524877 HIRAP54198 1017 aaPredicted RBP17.64■□□□□ 0.42
BEST1-203ENST00000524877 PMS2P54278 862 aa17.64■□□□□ 0.42
BEST1-203ENST00000524877 PTK2BQ14289 1009 aa17.64■□□□□ 0.42
BEST1-203ENST00000524877 RXFP2Q8WXD0 754 aa17.64■□□□□ 0.42
BEST1-203ENST00000524877 NIFKQ9BYG3 293 aaKnown RBP17.64■□□□□ 0.42
BEST1-203ENST00000524877 LATS2Q9NRM7 1088 aa17.64■□□□□ 0.42
BEST1-203ENST00000524877 TLE2Q04725 743 aa17.64■□□□□ 0.41
BEST1-203ENST00000524877 PTK6Q13882 451 aa17.64■□□□□ 0.41
BEST1-203ENST00000524877 C1QTNF7Q9BXJ2 289 aa17.64■□□□□ 0.41
BEST1-203ENST00000524877 SRLQ86TD4 932 aa17.64■□□□□ 0.41
BEST1-203ENST00000524877 SLC47A2Q86VL8 602 aa17.64■□□□□ 0.41
BEST1-203ENST00000524877 FAM131BQ86XD5 332 aa17.64■□□□□ 0.41
BEST1-203ENST00000524877 CFAP61Q8NHU2 1237 aa17.64■□□□□ 0.41
BEST1-203ENST00000524877 PPP1R16AQ96I34 528 aa17.64■□□□□ 0.41
BEST1-203ENST00000524877 CHP1Q99653 195 aa17.64■□□□□ 0.41
BEST1-203ENST00000524877 HAUS8Q9BT25 410 aa17.64■□□□□ 0.41
BEST1-203ENST00000524877 RNF19AQ9NV58 838 aa17.64■□□□□ 0.41
BEST1-203ENST00000524877 NT5C1B-RDH14C9J2C7 533 aa17.64■□□□□ 0.41
BEST1-203ENST00000524877 IGSF6O95976 241 aa17.64■□□□□ 0.41
BEST1-203ENST00000524877 PNMA6AP0CW24 399 aaPredicted RBP17.64■□□□□ 0.41
BEST1-203ENST00000524877 OCRLQ01968 901 aa17.64■□□□□ 0.41
BEST1-203ENST00000524877 ZNF268Q14587 947 aaPredicted RBP17.64■□□□□ 0.41
BEST1-203ENST00000524877 EMBQ6PCB8 327 aa17.64■□□□□ 0.41
BEST1-203ENST00000524877 MYLPFQ96A32 169 aa17.64■□□□□ 0.41
BEST1-203ENST00000524877 SDCCAG3Q96C92 435 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms