RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 NEU2Q9Y3R4 380 aa12.3□□□□□ -0.44
CSTF3-205ENST00000524775 MTCL1Q9Y4B5 1905 aaKnown RBP12.29□□□□□ -0.44
CSTF3-205ENST00000524775 DOCK4Q8N1I0 1966 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 FAM187AA6NFU0 413 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 OR6C75A6NL08 312 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 YJEFN3A6XGL0 299 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 E7ENQ6 273 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 TTI1O43156 1089 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 UPP2O95045 317 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 EN2P19622 333 aaPredicted RBP12.29□□□□□ -0.44
CSTF3-205ENST00000524775 IL4RP24394 825 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 ECHS1P30084 290 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 SDC4P31431 198 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 CARSP49589 748 aaKnown RBP12.29□□□□□ -0.44
CSTF3-205ENST00000524775 ATXN1P54253 815 aaKnown RBP12.29□□□□□ -0.44
CSTF3-205ENST00000524775 SLC8A3P57103 927 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 WDR5P61964 334 aaKnown RBP12.29□□□□□ -0.44
CSTF3-205ENST00000524775 YWHAZP63104 245 aaKnown RBP12.29□□□□□ -0.44
CSTF3-205ENST00000524775 ATP11AP98196 1134 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 KCTD19Q17RG1 926 aaPredicted RBP12.29□□□□□ -0.44
CSTF3-205ENST00000524775 SLC25A52Q3SY17 297 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 SLC39A12Q504Y0 691 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 KCNT1Q5JUK3 1230 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 RTP2Q5QGT7 225 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 SYPL2Q5VXT5 272 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 DUPD1Q68J44 220 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 STRADAQ7RTN6 431 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 TMCO2Q7Z6W1 182 aaPredicted RBP12.29□□□□□ -0.44
CSTF3-205ENST00000524775 TEKT4Q8WW24 435 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 MAIP1Q8WWC4 291 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 C1orf54Q8WWF1 131 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 IRGQQ8WZA9 623 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 MAGOHBQ96A72 148 aaKnown RBP12.29□□□□□ -0.44
CSTF3-205ENST00000524775 TBCBQ99426 244 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 TMEM106CQ9BVX2 250 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 MCOLN1Q9GZU1 580 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 PLEKHA4Q9H4M7 779 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 EPB41L5Q9HCM4 733 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 DMAP1Q9NPF5 467 aaPredicted RBP12.29□□□□□ -0.44
CSTF3-205ENST00000524775 IL23AQ9NPF7 189 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 FAM53CQ9NYF3 392 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 IL37Q9NZH6 218 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 MTUS1Q9ULD2 1270 aa12.29□□□□□ -0.44
CSTF3-205ENST00000524775 SF3B1O75533 1304 aaKnown RBP eCLIP12.29□□□□□ -0.447e-8■■■■■ 37.5
CSTF3-205ENST00000524775 OBSL1O75147 1896 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 GOLGA6L10A0A0M3HER8 536 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 LRRD1A4D1F6 860 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 ZBED1O96006 694 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 USP17L7P0C7H9 530 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 ACRP10323 421 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 NOS2P35228 1153 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 MAGEA11P43364 429 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 KCNJ1P48048 391 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 FNTAP49354 379 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 GUCY2DQ02846 1103 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 ELAVL2Q12926 359 aaKnown RBP12.28□□□□□ -0.44
CSTF3-205ENST00000524775 DHX34Q14147 1143 aaKnown RBP12.28□□□□□ -0.44
CSTF3-205ENST00000524775 CCNG2Q16589 344 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 CA9Q16790 459 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 CDO1Q16878 200 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 SMTNL2Q2TAL5 461 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 CTXN3Q4LDR2 81 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 BOLA3Q53S33 107 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 TFDP3Q5H9I0 405 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 CCDC70Q6NSX1 233 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 C4orf50Q6ZRC1 276 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 BBS12Q6ZW61 710 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 BEND5Q7L4P6 421 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 DCP1BQ8IZD4 617 aaKnown RBP12.28□□□□□ -0.44
CSTF3-205ENST00000524775 SIX6OS1Q8N1H7 587 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 EIF1ADQ8N9N8 165 aaKnown RBP12.28□□□□□ -0.44
CSTF3-205ENST00000524775 CCDC26Q8TAB7 109 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 ATG4AQ8WYN0 398 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 FUBP3Q96I24 572 aaKnown RBP eCLIP12.28□□□□□ -0.44
CSTF3-205ENST00000524775 IGSF21Q96ID5 467 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 NCAPGQ9BPX3 1015 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 TRIM51Q9BSJ1 452 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 SNRNP25Q9BV90 132 aaKnown RBP12.28□□□□□ -0.44
CSTF3-205ENST00000524775 FUT8Q9BYC5 575 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 MAGEB5Q9BZ81 275 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 NGRNQ9NPE2 291 aaKnown RBP12.28□□□□□ -0.44
CSTF3-205ENST00000524775 ARGLU1Q9NWB6 273 aaPredicted RBP12.28□□□□□ -0.44
CSTF3-205ENST00000524775 MTMR10Q9NXD2 777 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 NAALADL1Q9UQQ1 740 aa12.28□□□□□ -0.44
CSTF3-205ENST00000524775 GBF1Q92538 1859 aa12.27□□□□□ -0.44
CSTF3-205ENST00000524775 ESYT3A0FGR9 886 aa12.27□□□□□ -0.45
CSTF3-205ENST00000524775 MAP2K7O14733 419 aa12.27□□□□□ -0.45
CSTF3-205ENST00000524775 MDM4O15151 490 aa12.27□□□□□ -0.45
CSTF3-205ENST00000524775 ADAM12O43184 909 aa12.27□□□□□ -0.45
CSTF3-205ENST00000524775 EFCAB14O75071 495 aa12.27□□□□□ -0.45
CSTF3-205ENST00000524775 SASH3O75995 380 aa12.27□□□□□ -0.45
CSTF3-205ENST00000524775 LTFP02788 710 aa12.27□□□□□ -0.45
CSTF3-205ENST00000524775 AMHP03971 560 aa12.27□□□□□ -0.45
CSTF3-205ENST00000524775 LINC00271P0C7V0 271 aa12.27□□□□□ -0.45
CSTF3-205ENST00000524775 RAG1P15918 1043 aa12.27□□□□□ -0.45
CSTF3-205ENST00000524775 MCM3P25205 808 aa12.27□□□□□ -0.45
CSTF3-205ENST00000524775 L1CAMP32004 1257 aa12.27□□□□□ -0.45
CSTF3-205ENST00000524775 PGFP49763 221 aa12.27□□□□□ -0.45
CSTF3-205ENST00000524775 DRG2P55039 364 aaKnown RBP12.27□□□□□ -0.45
CSTF3-205ENST00000524775 DR1Q01658 176 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms