RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 FXR1P51114 621 aaKnown RBP eCLIP3.65□□□□□ -1.83
CSDE1-208ENST00000524652 ADKP55263 362 aaKnown RBP3.65□□□□□ -1.83
CSDE1-208ENST00000524652 KIF23Q02241 960 aaPredicted RBP3.65□□□□□ -1.83
CSDE1-208ENST00000524652 SLC10A2Q12908 348 aaPredicted RBP3.65□□□□□ -1.83
CSDE1-208ENST00000524652 LLGL1Q15334 1064 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 SUMO4Q6EEV6 95 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 SLC4A10Q6U841 1118 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 PI4KAP1Q8N8J0 262 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 SEMA6DQ8NFY4 1073 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 KAT5Q92993 513 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 RFKQ969G6 155 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 MYD88Q99836 296 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 CNPPD1Q9BV87 410 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 SIK2Q9H0K1 926 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 BRD9Q9H8M2 597 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 SPC25Q9HBM1 224 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 SMC4Q9NTJ3 1288 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 HYPKQ9NX55 129 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 EHD3Q9NZN3 535 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 CFAP97Q9P2B7 532 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 ADAM21Q9UKJ8 722 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 TRHDEQ9UKU6 1024 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 NOB1Q9ULX3 412 aaKnown RBP3.65□□□□□ -1.83
CSDE1-208ENST00000524652 PCDHGA9Q9Y5G4 932 aaKnown RBP3.65□□□□□ -1.83
CSDE1-208ENST00000524652 PCDHGA8Q9Y5G5 932 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 PCDHGA7Q9Y5G6 932 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 PCDHGA6Q9Y5G7 932 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 PCDHGA3Q9Y5H0 932 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 ABCC4O15439 1325 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 RNF123Q5XPI4 1314 aa3.65□□□□□ -1.83
CSDE1-208ENST00000524652 C10orf71Q711Q0 1435 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 NT5C1B-RDH14C9J2C7 533 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 F5H697 171 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 NTSR2O95665 410 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 MALP21145 153 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 DRD4P21917 467 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 GPTP24298 496 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 RFC4P35249 363 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 ZNF81P51508 661 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 EXOSC10Q01780 885 aaKnown RBP3.64□□□□□ -1.83
CSDE1-208ENST00000524652 MTMR1Q13613 665 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 ABCB5Q2M3G0 1257 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 PLAC9Q5JTB6 97 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 BEND3Q5T5X7 828 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 SUSD4Q5VX71 490 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 KSR2Q6VAB6 950 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 ZNF34Q8IZ26 560 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 PLBD2Q8NHP8 589 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 FRAT1Q92837 279 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-208ENST00000524652 ZNF778Q96MU6 729 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 VRK1Q99986 396 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-208ENST00000524652 ISCA1Q9BUE6 129 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 STK31Q9BXU1 1019 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 TPSD1Q9BZJ3 242 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 GPR35Q9HC97 309 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 ETAA1Q9NY74 926 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 SERPINB13Q9UIV8 391 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 PADI4Q9UM07 663 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 NR2E3Q9Y5X4 410 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 PSME4Q14997 1843 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 PTPRCP08575 1304 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 ARAP2Q8WZ64 1704 aa3.64□□□□□ -1.83
CSDE1-208ENST00000524652 SCN9AQ15858 1988 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 ZNF785A8K8V0 405 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 ERVV-1B6SEH8 477 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 GABRDO14764 452 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 NXPH3O95157 252 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 ARIH2O95376 493 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 RHOP08100 348 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 MMP10P09238 476 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 ZFXP17010 805 aaPredicted RBP3.63□□□□□ -1.83
CSDE1-208ENST00000524652 ITGB6P18564 788 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 ITGALP20701 1170 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 CCT8P50990 548 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 GUCY2FP51841 1108 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 RRP1P56182 461 aaKnown RBP3.63□□□□□ -1.83
CSDE1-208ENST00000524652 DSC2Q02487 901 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 TCF15Q12870 199 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 HABP2Q14520 560 aaPredicted RBP3.63□□□□□ -1.83
CSDE1-208ENST00000524652 UAP1L1Q3KQV9 507 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 KHDC1Q4VXA5 237 aaKnown RBP3.63□□□□□ -1.83
CSDE1-208ENST00000524652 TEDDM1Q5T9Z0 273 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 PRR5LQ6MZQ0 368 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 CLEC4GQ6UXB4 293 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 ATF7IPQ6VMQ6 1270 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 KIF6Q6ZMV9 814 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 RASAL3Q86YV0 1011 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 FAM109AQ8N4B1 249 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 TMEM57Q8N5G2 664 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 PSD4Q8NDX1 1056 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 DNAAF4Q8WXU2 420 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 FKBP10Q96AY3 582 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 KAZALD1Q96I82 304 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 SLC13A1Q9BZW2 595 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 SEMA4CQ9C0C4 833 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 ST3GAL5Q9UNP4 418 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 NIP7Q9Y221 180 aaKnown RBP eCLIP3.63□□□□□ -1.83
CSDE1-208ENST00000524652 POLHQ9Y253 713 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.63□□□□□ -1.83
CSDE1-208ENST00000524652 ZNF804BA4D1E1 1349 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms