RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 HHLA1C9JL84 531 aa18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 BEST1O76090 585 aa18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 AVPR1AP37288 418 aa18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 GPD2P43304 727 aa18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 TUBP50607 506 aa18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 CDR2Q01850 454 aa18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 SNX30Q5VWJ9 437 aa18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 GAREM2Q75VX8 874 aa18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 VPS36Q86VN1 386 aa18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 NPAS3Q8IXF0 933 aa18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 ITFG1Q8TB96 612 aa18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 SHKBP1Q8TBC3 707 aa18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 FEZF2Q8TBJ5 459 aa18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 EPS8L1Q8TE68 723 aa18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 IRGQQ8WZA9 623 aa18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 SECISBP2LQ93073 1101 aaKnown RBP18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 TTYH3Q9C0H2 523 aa18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 IL21Q9HBE4 155 aa18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 ZNF334Q9HCZ1 680 aaPredicted RBP18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 TMEM30AQ9NV96 361 aa18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 WNT16Q9UBV4 365 aa18.49■□□□□ 0.55
PACSIN3-202ENST00000524509 C2orf16Q68DN1 1984 aa18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 TRAV19A0A0A6YYK7 116 aa18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 MED19A0JLT2 244 aaPredicted RBP18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 ZBED1O96006 694 aa18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 RALAP11233 206 aa18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 TKTL1P51854 596 aa18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 IFRD2Q12894 506 aaPredicted RBP18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 ASIC2Q16515 512 aa18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 SLC5A9Q2M3M2 681 aa18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 GPR158Q5T848 1215 aa18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 PM20D1Q6GTS8 502 aa18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 DGLUCYQ7Z3D6 616 aa18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 GAS2L3Q86XJ1 694 aa18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 ZDHHC17Q8IUH5 632 aa18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 VSTM4Q8IW00 320 aa18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 ZNF276Q8N554 614 aa18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 SCAMP5Q8TAC9 235 aa18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 IPO4Q8TEX9 1081 aaKnown RBP18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 BAP1Q92560 729 aa18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 MRFAP1L1Q96HT8 127 aa18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 TRPV4Q9HBA0 871 aa18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 ZNHIT6Q9NWK9 470 aaKnown RBP18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 CLIC5Q9NZA1 410 aa18.48■□□□□ 0.55
PACSIN3-202ENST00000524509 ZNF840PA6NDX5 716 aa18.47■□□□□ 0.55
PACSIN3-202ENST00000524509 LRRC53A6NM62 1247 aa18.47■□□□□ 0.55
PACSIN3-202ENST00000524509 USP17L7P0C7H9 530 aa18.47■□□□□ 0.55
PACSIN3-202ENST00000524509 CEBPBP17676 345 aa18.47■□□□□ 0.55
PACSIN3-202ENST00000524509 CCR2P41597 374 aa18.47■□□□□ 0.55
PACSIN3-202ENST00000524509 RPL34P49207 117 aaKnown RBP18.47■□□□□ 0.55
PACSIN3-202ENST00000524509 ARID5AQ03989 594 aa18.47■□□□□ 0.55
PACSIN3-202ENST00000524509 TEAD2Q15562 447 aa18.47■□□□□ 0.55
PACSIN3-202ENST00000524509 HECTD3Q5T447 861 aa18.47■□□□□ 0.55
PACSIN3-202ENST00000524509 SMARCD2Q92925 531 aa18.47■□□□□ 0.55
PACSIN3-202ENST00000524509 TCEAL4Q96EI5 215 aa18.47■□□□□ 0.55
PACSIN3-202ENST00000524509 MCRS1Q96EZ8 462 aa18.47■□□□□ 0.55
PACSIN3-202ENST00000524509 MYADMQ96S97 322 aa18.47■□□□□ 0.55
PACSIN3-202ENST00000524509 ZSWIM1Q9BR11 485 aa18.47■□□□□ 0.55
PACSIN3-202ENST00000524509 SYNCQ9H7C4 482 aa18.47■□□□□ 0.55
PACSIN3-202ENST00000524509 KIF9Q9HAQ2 790 aa18.47■□□□□ 0.55
PACSIN3-202ENST00000524509 ZFP14Q9HCL3 533 aa18.47■□□□□ 0.55
PACSIN3-202ENST00000524509 ST7Q9NRC1 585 aa18.47■□□□□ 0.55
PACSIN3-202ENST00000524509 TMEM51Q9NW97 253 aa18.47■□□□□ 0.55
PACSIN3-202ENST00000524509 OBP2AQ9NY56 170 aa18.47■□□□□ 0.55
PACSIN3-202ENST00000524509 DPYSL4O14531 572 aa18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 ABL1P00519 1130 aa18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 ZDHHC11BP0C7U3 371 aa18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 PNMA6AP0CW24 399 aaPredicted RBP18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 CDH5P33151 784 aaPredicted RBP18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 PRKCIP41743 596 aa18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 USP46P62068 366 aa18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 KLHL30Q0D2K2 578 aa18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 ZNF268Q14587 947 aaPredicted RBP18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 PUM1Q14671 1186 aaKnown RBP eCLIP18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 PMF1Q6P1K2 205 aa18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 DENND1BQ6P3S1 775 aa18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 KLHDC10Q6PID8 442 aa18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 TMEM110Q86TL2 294 aa18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 NOP9Q86U38 636 aaKnown RBP18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 DDX42Q86XP3 938 aaKnown RBP eCLIP18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 CNGA4Q8IV77 575 aa18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 DRC7Q8IY82 874 aa18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 CMTM8Q8IZV2 173 aa18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 KIAA1958Q8N8K9 716 aa18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 ING5Q8WYH8 240 aa18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 DDX1Q92499 740 aaKnown RBP18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 PPP1R13BQ96KQ4 1090 aa18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 SLC4A5Q9BY07 1137 aa18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 NACA2Q9H009 215 aa18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 ACP6Q9NPH0 428 aa18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 OLA1Q9NTK5 396 aaKnown RBP18.46■□□□□ 0.55
PACSIN3-202ENST00000524509 GOLGA6L6A8MZA4 724 aa18.45■□□□□ 0.54
PACSIN3-202ENST00000524509 STK25O00506 426 aa18.45■□□□□ 0.54
PACSIN3-202ENST00000524509 MOSPD3O75425 235 aa18.45■□□□□ 0.54
PACSIN3-202ENST00000524509 ECI2O75521 394 aa18.45■□□□□ 0.54
PACSIN3-202ENST00000524509 HDCP19113 662 aa18.45■□□□□ 0.54
PACSIN3-202ENST00000524509 GOLGA8FQ08AF8 430 aa18.45■□□□□ 0.54
PACSIN3-202ENST00000524509 GOLGA8DPQ0D2H9 430 aa18.45■□□□□ 0.54
PACSIN3-202ENST00000524509 ADIGQ0VDE8 80 aa18.45■□□□□ 0.54
PACSIN3-202ENST00000524509 PDCLQ13371 301 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms