RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 MZT2AQ6P582 158 aa7.05□□□□□ -1.28
CPNE3-206ENST00000523469 WDR53Q7Z5U6 358 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-206ENST00000523469 CAND1Q86VP6 1230 aaKnown RBP7.05□□□□□ -1.28
CPNE3-206ENST00000523469 R3HDM4Q96D70 268 aa7.05□□□□□ -1.28
CPNE3-206ENST00000523469 RSPRY1Q96DX4 576 aa7.05□□□□□ -1.28
CPNE3-206ENST00000523469 NLRC4Q9NPP4 1024 aa7.05□□□□□ -1.28
CPNE3-206ENST00000523469 HEYLQ9NQ87 328 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-206ENST00000523469 USP22Q9UPT9 525 aa7.05□□□□□ -1.28
CPNE3-206ENST00000523469 ENTPD2Q9Y5L3 495 aa7.05□□□□□ -1.28
CPNE3-206ENST00000523469 MAGI2Q86UL8 1455 aa7.04□□□□□ -1.28
CPNE3-206ENST00000523469 C9orf84Q5VXU9 1444 aa7.04□□□□□ -1.28
CPNE3-206ENST00000523469 EBLN1P0CF75 366 aa7.04□□□□□ -1.28
CPNE3-206ENST00000523469 MYL4P12829 197 aa7.04□□□□□ -1.28
CPNE3-206ENST00000523469 PDE1AP54750 535 aa7.04□□□□□ -1.28
CPNE3-206ENST00000523469 TIAL1Q01085 375 aaKnown RBP eCLIP7.04□□□□□ -1.28
CPNE3-206ENST00000523469 STK3Q13188 491 aa7.04□□□□□ -1.28
CPNE3-206ENST00000523469 PMS2P11Q13670 270 aa7.04□□□□□ -1.28
CPNE3-206ENST00000523469 ARL13BQ3SXY8 428 aa7.04□□□□□ -1.28
CPNE3-206ENST00000523469 ANKRD16Q6P6B7 361 aa7.04□□□□□ -1.28
CPNE3-206ENST00000523469 LRRC71Q8N4P6 559 aa7.04□□□□□ -1.28
CPNE3-206ENST00000523469 FANCBQ8NB91 859 aa7.04□□□□□ -1.28
CPNE3-206ENST00000523469 RP9Q8TA86 221 aaKnown RBP7.04□□□□□ -1.28
CPNE3-206ENST00000523469 DEPTORQ8TB45 409 aa7.04□□□□□ -1.28
CPNE3-206ENST00000523469 XAGE5Q8WWM1 108 aa7.04□□□□□ -1.28
CPNE3-206ENST00000523469 LRRC46Q96FV0 321 aa7.04□□□□□ -1.28
CPNE3-206ENST00000523469 HAPLN3Q96S86 360 aa7.04□□□□□ -1.28
CPNE3-206ENST00000523469 EIF2AQ9BY44 585 aaKnown RBP7.04□□□□□ -1.28
CPNE3-206ENST00000523469 MAGEB5Q9BZ81 275 aa7.04□□□□□ -1.28
CPNE3-206ENST00000523469 INO80BQ9C086 356 aaPredicted RBP7.04□□□□□ -1.28
CPNE3-206ENST00000523469 ZCWPW1Q9H0M4 648 aa7.04□□□□□ -1.28
CPNE3-206ENST00000523469 INSL6Q9Y581 213 aa7.04□□□□□ -1.28
CPNE3-206ENST00000523469 KIAA0355O15063 1070 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 PRKCBP05771 671 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 JUPP14923 745 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 CCT8P50990 548 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 PGDP52209 483 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 COPAP53621 1224 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 TPTEP56180 551 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 KCNAB1Q14722 419 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 FAM153CQ494X1 144 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 PARS2Q7L3T8 475 aaKnown RBP7.03□□□□□ -1.28
CPNE3-206ENST00000523469 CCDC150Q8NCX0 1101 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 ACRBPQ8NEB7 543 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 SGCZQ96LD1 299 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 UROC1Q96N76 676 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 TIMP4Q99727 224 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 VN1R3Q9BXE9 311 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 GJB4Q9NTQ9 266 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 DLL3Q9NYJ7 618 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 FNIP2Q9P278 1114 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 ZNHIT2Q9UHR6 403 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 GABRQQ9UN88 632 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 ST3GAL5Q9UNP4 418 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 DRG1Q9Y295 367 aaKnown RBP7.03□□□□□ -1.28
CPNE3-206ENST00000523469 GOLGA3Q08378 1498 aa7.03□□□□□ -1.28
CPNE3-206ENST00000523469 PSMD9O00233 223 aa7.02□□□□□ -1.29
CPNE3-206ENST00000523469 TJP3O95049 919 aa7.02□□□□□ -1.29
CPNE3-206ENST00000523469 DLDP09622 509 aaKnown RBP7.02□□□□□ -1.29
CPNE3-206ENST00000523469 FAM163BP0C2L3 166 aa7.02□□□□□ -1.29
CPNE3-206ENST00000523469 HARSP12081 509 aaKnown RBP7.02□□□□□ -1.29
CPNE3-206ENST00000523469 HGFP14210 728 aa7.02□□□□□ -1.29
CPNE3-206ENST00000523469 CYP2C18P33260 490 aa7.02□□□□□ -1.29
CPNE3-206ENST00000523469 MTHFSP49914 203 aa7.02□□□□□ -1.29
CPNE3-206ENST00000523469 GATMP50440 423 aa7.02□□□□□ -1.29
CPNE3-206ENST00000523469 SOX10P56693 466 aa7.02□□□□□ -1.29
CPNE3-206ENST00000523469 BTKQ06187 659 aa7.02□□□□□ -1.29
CPNE3-206ENST00000523469 BRD3Q15059 726 aa7.02□□□□□ -1.29
CPNE3-206ENST00000523469 MANEALQ5VSG8 457 aa7.02□□□□□ -1.29
CPNE3-206ENST00000523469 USP17L6PQ6QN14 398 aa7.02□□□□□ -1.29
CPNE3-206ENST00000523469 RAB11FIP4Q86YS3 637 aa7.02□□□□□ -1.29
CPNE3-206ENST00000523469 TXLNBQ8N3L3 684 aa7.02□□□□□ -1.29
CPNE3-206ENST00000523469 ZDHHC12Q96GR4 267 aa7.02□□□□□ -1.29
CPNE3-206ENST00000523469 ZBTB45Q96K62 511 aaPredicted RBP7.02□□□□□ -1.29
CPNE3-206ENST00000523469 FAM227BQ96M60 508 aa7.02□□□□□ -1.29
CPNE3-206ENST00000523469 DPCDQ9BVM2 203 aaPredicted RBP7.02□□□□□ -1.29
CPNE3-206ENST00000523469 CERS4Q9HA82 394 aa7.02□□□□□ -1.29
CPNE3-206ENST00000523469 DNAJB11Q9UBS4 358 aa7.02□□□□□ -1.29
CPNE3-206ENST00000523469 HPSEQ9Y251 543 aa7.02□□□□□ -1.29
CPNE3-206ENST00000523469 CPS1P31327 1500 aa7.01□□□□□ -1.29
CPNE3-206ENST00000523469 ZNF142P52746 1687 aaPredicted RBP7.01□□□□□ -1.29
CPNE3-206ENST00000523469 ATP10AO60312 1499 aa7.01□□□□□ -1.29
CPNE3-206ENST00000523469 A0A087WZ62 844 aa7.01□□□□□ -1.29
CPNE3-206ENST00000523469 QSOX1O00391 747 aa7.01□□□□□ -1.29
CPNE3-206ENST00000523469 KCNQ3O43525 872 aa7.01□□□□□ -1.29
CPNE3-206ENST00000523469 VNN1O95497 513 aa7.01□□□□□ -1.29
CPNE3-206ENST00000523469 WT1P19544 449 aaPredicted RBP7.01□□□□□ -1.29
CPNE3-206ENST00000523469 CLK3P49761 638 aaKnown RBP7.01□□□□□ -1.29
CPNE3-206ENST00000523469 TIRAPP58753 221 aa7.01□□□□□ -1.29
CPNE3-206ENST00000523469 SLC35G1Q2M3R5 365 aa7.01□□□□□ -1.29
CPNE3-206ENST00000523469 AARS2Q5JTZ9 985 aaKnown RBP7.01□□□□□ -1.29
CPNE3-206ENST00000523469 DGKKQ5KSL6 1271 aa7.01□□□□□ -1.29
CPNE3-206ENST00000523469 TSTD2Q5T7W7 516 aa7.01□□□□□ -1.29
CPNE3-206ENST00000523469 STRIP1Q5VSL9 837 aa7.01□□□□□ -1.29
CPNE3-206ENST00000523469 MTHFD1LQ6UB35 978 aa7.01□□□□□ -1.29
CPNE3-206ENST00000523469 SAMD3Q8N6K7 520 aa7.01□□□□□ -1.29
CPNE3-206ENST00000523469 TRIM36Q9NQ86 728 aa7.01□□□□□ -1.29
CPNE3-206ENST00000523469 DUSP22Q9NRW4 184 aa7.01□□□□□ -1.29
CPNE3-206ENST00000523469 CCNL1Q9UK58 526 aaPredicted RBP7.01□□□□□ -1.29
CPNE3-206ENST00000523469 MAN2B2Q9Y2E5 1009 aa7.01□□□□□ -1.29
CPNE3-206ENST00000523469 POLR1AO95602 1720 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms