RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 GPRIN1Q7Z2K8 1008 aa17.13■□□□□ 0.33
CLN8-206ENST00000523237 TATDN2Q93075 761 aa17.13■□□□□ 0.33
CLN8-206ENST00000523237 ARID3AQ99856 593 aa17.13■□□□□ 0.33
CLN8-206ENST00000523237 DUSP16Q9BY84 665 aa17.13■□□□□ 0.33
CLN8-206ENST00000523237 GMEB2Q9UKD1 530 aa17.13■□□□□ 0.33
CLN8-206ENST00000523237 EP300Q09472 2414 aaPredicted RBP17.13■□□□□ 0.33
CLN8-206ENST00000523237 BICDL2A1A5D9 508 aa17.12■□□□□ 0.33
CLN8-206ENST00000523237 SCAMP3O14828 347 aaKnown RBP17.12■□□□□ 0.33
CLN8-206ENST00000523237 CYP26A1O43174 497 aa17.12■□□□□ 0.33
CLN8-206ENST00000523237 ADH1CP00326 375 aa17.12■□□□□ 0.33
CLN8-206ENST00000523237 OPRD1P41143 372 aa17.12■□□□□ 0.33
CLN8-206ENST00000523237 RAD23BP54727 409 aa17.12■□□□□ 0.33
CLN8-206ENST00000523237 YWHAEP62258 255 aaKnown RBP17.12■□□□□ 0.33
CLN8-206ENST00000523237 SIM2Q14190 667 aaPredicted RBP17.12■□□□□ 0.33
CLN8-206ENST00000523237 CCDC40Q4G0X9 1142 aa17.12■□□□□ 0.33
CLN8-206ENST00000523237 PRR23BQ6ZRT6 265 aa17.12■□□□□ 0.33
CLN8-206ENST00000523237 WDR5BQ86VZ2 330 aa17.12■□□□□ 0.33
CLN8-206ENST00000523237 GPR161Q8N6U8 529 aaKnown RBP17.12■□□□□ 0.33
CLN8-206ENST00000523237 SLC4A11Q8NBS3 891 aa17.12■□□□□ 0.33
CLN8-206ENST00000523237 RPLP0P6Q8NHW5 317 aa17.12■□□□□ 0.33
CLN8-206ENST00000523237 ACDQ96AP0 544 aa17.12■□□□□ 0.33
CLN8-206ENST00000523237 DUSP9Q99956 384 aaKnown RBP17.12■□□□□ 0.33
CLN8-206ENST00000523237 CYLDQ9NQC7 956 aa17.12■□□□□ 0.33
CLN8-206ENST00000523237 CCDC163A0A0D9SF12 145 aa17.11■□□□□ 0.33
CLN8-206ENST00000523237 BIN1O00499 593 aa17.11■□□□□ 0.33
CLN8-206ENST00000523237 HRO43593 1189 aa17.11■□□□□ 0.33
CLN8-206ENST00000523237 ADH5P11766 374 aa17.11■□□□□ 0.33
CLN8-206ENST00000523237 BMP6P22004 513 aa17.11■□□□□ 0.33
CLN8-206ENST00000523237 ATP5C1P36542 298 aaKnown RBP17.11■□□□□ 0.33
CLN8-206ENST00000523237 EIF2DP41214 584 aaKnown RBP17.11■□□□□ 0.33
CLN8-206ENST00000523237 PGFP49763 221 aa17.11■□□□□ 0.33
CLN8-206ENST00000523237 KIF11P52732 1056 aa17.11■□□□□ 0.33
CLN8-206ENST00000523237 SLC8A3P57103 927 aa17.11■□□□□ 0.33
CLN8-206ENST00000523237 GOLGA8FQ08AF8 430 aa17.11■□□□□ 0.33
CLN8-206ENST00000523237 GOLGA8DPQ0D2H9 430 aa17.11■□□□□ 0.33
CLN8-206ENST00000523237 CUL2Q13617 745 aa17.11■□□□□ 0.33
CLN8-206ENST00000523237 MORC3Q14149 939 aa17.11■□□□□ 0.33
CLN8-206ENST00000523237 GAB4Q2WGN9 574 aa17.11■□□□□ 0.33
CLN8-206ENST00000523237 ARHGAP17Q68EM7 881 aa17.11■□□□□ 0.33
CLN8-206ENST00000523237 LAIR1Q6GTX8 287 aa17.11■□□□□ 0.33
CLN8-206ENST00000523237 TTI2Q6NXR4 508 aa17.11■□□□□ 0.33
CLN8-206ENST00000523237 RHBDF2Q6PJF5 856 aa17.11■□□□□ 0.33
CLN8-206ENST00000523237 FOXR2Q6PJQ5 311 aa17.11■□□□□ 0.33
CLN8-206ENST00000523237 NELFBQ8WX92 580 aa17.11■□□□□ 0.33
CLN8-206ENST00000523237 EZH1Q92800 747 aaPredicted RBP17.11■□□□□ 0.33
CLN8-206ENST00000523237 EML5Q05BV3 1969 aa17.1■□□□□ 0.33
CLN8-206ENST00000523237 PPP1R3GB7ZBB8 358 aa17.1■□□□□ 0.33
CLN8-206ENST00000523237 IRF1P10914 325 aa17.1■□□□□ 0.33
CLN8-206ENST00000523237 TBXAS1P24557 533 aaPredicted RBP17.1■□□□□ 0.33
CLN8-206ENST00000523237 ID4P47928 161 aa17.1■□□□□ 0.33
CLN8-206ENST00000523237 FMO5P49326 533 aa17.1■□□□□ 0.33
CLN8-206ENST00000523237 PSEN1P49768 467 aa17.1■□□□□ 0.33
CLN8-206ENST00000523237 LPAL2Q16609 132 aa17.1■□□□□ 0.33
CLN8-206ENST00000523237 LY6G5CQ5SRR4 150 aa17.1■□□□□ 0.33
CLN8-206ENST00000523237 SYT13Q7L8C5 426 aa17.1■□□□□ 0.33
CLN8-206ENST00000523237 CCDC186Q7Z3E2 898 aa17.1■□□□□ 0.33
CLN8-206ENST00000523237 CAMKK1Q8N5S9 505 aa17.1■□□□□ 0.33
CLN8-206ENST00000523237 UBXN6Q9BZV1 441 aa17.1■□□□□ 0.33
CLN8-206ENST00000523237 OSER1Q9NX31 292 aa17.1■□□□□ 0.33
CLN8-206ENST00000523237 CTNND2Q9UQB3 1225 aa17.1■□□□□ 0.33
CLN8-206ENST00000523237 A0A1W2PQH9 124 aa17.09■□□□□ 0.33
CLN8-206ENST00000523237 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.09■□□□□ 0.33
CLN8-206ENST00000523237 PMM2O15305 246 aa17.09■□□□□ 0.33
CLN8-206ENST00000523237 TBX18O95935 607 aa17.09■□□□□ 0.33
CLN8-206ENST00000523237 RARGP13631 454 aa17.09■□□□□ 0.33
CLN8-206ENST00000523237 HOXC13P31276 330 aa17.09■□□□□ 0.33
CLN8-206ENST00000523237 PXNP49023 591 aaPredicted RBP17.09■□□□□ 0.33
CLN8-206ENST00000523237 UBE2HP62256 183 aa17.09■□□□□ 0.33
CLN8-206ENST00000523237 GAD2Q05329 585 aa17.09■□□□□ 0.33
CLN8-206ENST00000523237 CETN1Q12798 172 aa17.09■□□□□ 0.33
CLN8-206ENST00000523237 SRSF5Q13243 272 aaKnown RBP17.09■□□□□ 0.33
CLN8-206ENST00000523237 BTBD8Q5XKL5 378 aa17.09■□□□□ 0.33
CLN8-206ENST00000523237 KLHDC10Q6PID8 442 aa17.09■□□□□ 0.33
CLN8-206ENST00000523237 CEP68Q76N32 757 aa17.09■□□□□ 0.33
CLN8-206ENST00000523237 TADA2BQ86TJ2 420 aa17.09■□□□□ 0.33
CLN8-206ENST00000523237 BBS7Q8IWZ6 715 aa17.09■□□□□ 0.33
CLN8-206ENST00000523237 ANKRD52Q8NB46 1076 aa17.09■□□□□ 0.33
CLN8-206ENST00000523237 PNKPQ96T60 521 aa17.09■□□□□ 0.33
CLN8-206ENST00000523237 KLF16Q9BXK1 252 aaPredicted RBP17.09■□□□□ 0.33
CLN8-206ENST00000523237 NMUR1Q9HB89 426 aa17.09■□□□□ 0.33
CLN8-206ENST00000523237 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.09■□□□□ 0.33
CLN8-206ENST00000523237 CHMP5Q9NZZ3 219 aa17.09■□□□□ 0.33
CLN8-206ENST00000523237 NAGPAQ9UK23 515 aa17.09■□□□□ 0.33
CLN8-206ENST00000523237 USP3Q9Y6I4 520 aa17.09■□□□□ 0.33
CLN8-206ENST00000523237 SPTBN4Q9H254 2564 aa17.09■□□□□ 0.33
CLN8-206ENST00000523237 RALGAPA1Q6GYQ0 2036 aa17.08■□□□□ 0.33
CLN8-206ENST00000523237 K7EQS6 105 aa17.08■□□□□ 0.32
CLN8-206ENST00000523237 APODP05090 189 aa17.08■□□□□ 0.32
CLN8-206ENST00000523237 SLC6A11P48066 632 aa17.08■□□□□ 0.32
CLN8-206ENST00000523237 SEC13P55735 322 aa17.08■□□□□ 0.32
CLN8-206ENST00000523237 LRMPQ12912 555 aa17.08■□□□□ 0.32
CLN8-206ENST00000523237 PAK1Q13153 545 aa17.08■□□□□ 0.32
CLN8-206ENST00000523237 DMC1Q14565 340 aa17.08■□□□□ 0.32
CLN8-206ENST00000523237 SGO2Q562F6 1265 aa17.08■□□□□ 0.32
CLN8-206ENST00000523237 C2orf27AQ580R0 203 aa17.08■□□□□ 0.32
CLN8-206ENST00000523237 C10orf120Q5SQS8 335 aa17.08■□□□□ 0.32
CLN8-206ENST00000523237 HTR3DQ70Z44 454 aa17.08■□□□□ 0.32
CLN8-206ENST00000523237 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.08■□□□□ 0.32
CLN8-206ENST00000523237 TRIML1Q8N9V2 468 aa17.08■□□□□ 0.32
CLN8-206ENST00000523237 USP33Q8TEY7 942 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms