RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 DESP17661 470 aa16.15■□□□□ 0.18
CTNNA1-236ENST00000522792 GPR15P49685 360 aa16.15■□□□□ 0.18
CTNNA1-236ENST00000522792 SULT1E1P49888 294 aa16.15■□□□□ 0.18
CTNNA1-236ENST00000522792 CLCN6P51797 869 aa16.15■□□□□ 0.18
CTNNA1-236ENST00000522792 PITX1P78337 314 aaPredicted RBP16.15■□□□□ 0.18
CTNNA1-236ENST00000522792 NFE2Q16621 373 aaPredicted RBP16.15■□□□□ 0.18
CTNNA1-236ENST00000522792 GLE1Q53GS7 698 aaKnown RBP16.15■□□□□ 0.18
CTNNA1-236ENST00000522792 SDHAF4Q5VUM1 108 aa16.15■□□□□ 0.18
CTNNA1-236ENST00000522792 ARCQ7LC44 396 aa16.15■□□□□ 0.18
CTNNA1-236ENST00000522792 C7orf61Q8IZ16 206 aa16.15■□□□□ 0.18
CTNNA1-236ENST00000522792 TTC9BQ8N6N2 239 aa16.15■□□□□ 0.18
CTNNA1-236ENST00000522792 SCAMP5Q8TAC9 235 aa16.15■□□□□ 0.18
CTNNA1-236ENST00000522792 C1orf54Q8WWF1 131 aa16.15■□□□□ 0.18
CTNNA1-236ENST00000522792 MAGOHBQ96A72 148 aaKnown RBP16.15■□□□□ 0.18
CTNNA1-236ENST00000522792 C11orf84Q9BUA3 381 aaPredicted RBP16.15■□□□□ 0.18
CTNNA1-236ENST00000522792 GPATCH2LQ9NWQ4 482 aa16.15■□□□□ 0.18
CTNNA1-236ENST00000522792 CALCOCO1Q9P1Z2 691 aa16.15■□□□□ 0.18
CTNNA1-236ENST00000522792 SYNJ2BP-COX16A0A087WUM0 186 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 GLI1P08151 1106 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 CD48P09326 243 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 CETN2P41208 172 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 ADCY2Q08462 1091 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 SYPL2Q5VXT5 272 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 TTC27Q6P3X3 843 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 ZNF365Q70YC5 407 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 ATAD1Q8NBU5 361 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 ATG4AQ8WYN0 398 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 ZNF558Q96NG5 402 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 YME1L1Q96TA2 773 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 FAM118BQ9BPY3 351 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 SLITRK6Q9H5Y7 841 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 POPDC2Q9HBU9 364 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 ARGLU1Q9NWB6 273 aaPredicted RBP16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 COX16Q9P0S2 106 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 STIM2Q9P246 746 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 NAALADL1Q9UQQ1 740 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 R3HDM2Q9Y2K5 976 aaKnown RBP16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 PCDHB5Q9Y5E4 795 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 PTPRSQ13332 1948 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 C3orf70A6NLC5 250 aaPredicted RBP16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 H7C4K7 107 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 C2CD2LO14523 706 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 TTI1O43156 1089 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 KDELR1P24390 212 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 CDKN2BP42772 138 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 SLC5A3P53794 718 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 GUCY2DQ02846 1103 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 FPGSQ05932 587 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 KLF1Q13351 362 aaPredicted RBP16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 SNX1Q13596 522 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 DDR2Q16832 855 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 WDR93Q6P2C0 686 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 ANKS3Q6ZW76 656 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 BHLHA9Q7RTU4 235 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 GSPT2Q8IYD1 628 aaKnown RBP16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 CMTR2Q8IYT2 770 aaKnown RBP16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 KCTD6Q8NC69 237 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 RIN2Q8WYP3 895 aaPredicted RBP16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 SLC2A13Q96QE2 648 aa16.14■□□□□ 0.17
CTNNA1-236ENST00000522792 hCG_1818297A0A087WSY0 165 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 ESYT3A0FGR9 886 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 CAPN9O14815 690 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 SOAT2O75908 522 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 FGBP02675 491 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 FYNP06241 537 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 SYN1P17600 705 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 RPL17P18621 184 aaKnown RBP16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 NOS2P35228 1153 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 EPHB4P54760 987 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 PPIGQ13427 754 aaKnown RBP eCLIP16.13■□□□□ 0.178e-9■■□□□ 13.7
CTNNA1-236ENST00000522792 USP41Q3LFD5 358 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 SLC25A52Q3SY17 297 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 TFDP3Q5H9I0 405 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 OTUD1Q5VV17 481 aaPredicted RBP16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 RNF19BQ6ZMZ0 732 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 CCDC26Q8TAB7 109 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 EDEM1Q92611 657 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 CENPIQ92674 756 aaPredicted RBP16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 FUBP3Q96I24 572 aaKnown RBP eCLIP16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 EPB41L5Q9HCM4 733 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 PNPLA8Q9NP80 782 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 CHST7Q9NS84 486 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 SLC27A5Q9Y2P5 690 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 CDY1Q9Y6F8 540 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 PATJQ8NI35 1801 aa16.13■□□□□ 0.17
CTNNA1-236ENST00000522792 ADAM12O43184 909 aa16.12■□□□□ 0.17
CTNNA1-236ENST00000522792 TBC1D4O60343 1298 aa16.12■□□□□ 0.17
CTNNA1-236ENST00000522792 SEC31AO94979 1220 aaKnown RBP16.12■□□□□ 0.17
CTNNA1-236ENST00000522792 EFEMP2O95967 443 aa16.12■□□□□ 0.17
CTNNA1-236ENST00000522792 LTFP02788 710 aa16.12■□□□□ 0.17
CTNNA1-236ENST00000522792 CHRNA3P32297 505 aa16.12■□□□□ 0.17
CTNNA1-236ENST00000522792 KCNJ1P48048 391 aa16.12■□□□□ 0.17
CTNNA1-236ENST00000522792 COPS2P61201 443 aa16.12■□□□□ 0.17
CTNNA1-236ENST00000522792 DYNLT1P63172 113 aa16.12■□□□□ 0.17
CTNNA1-236ENST00000522792 ZC3H12AQ5D1E8 599 aaKnown RBP16.12■□□□□ 0.17
CTNNA1-236ENST00000522792 CCDC137Q6PK04 289 aaKnown RBP16.12■□□□□ 0.17
CTNNA1-236ENST00000522792 SLC39A11Q8N1S5 342 aa16.12■□□□□ 0.17
CTNNA1-236ENST00000522792 COLGALT1Q8NBJ5 622 aa16.12■□□□□ 0.17
CTNNA1-236ENST00000522792 CMASQ8NFW8 434 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms