RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 MLXIPQ9HAP2 919 aa5.49□□□□□ -1.53
HMGB1P1-201ENST00000522557 HDAC9Q9UKV0 1011 aa5.49□□□□□ -1.53
HMGB1P1-201ENST00000522557 SSX2IPQ9Y2D8 614 aa5.49□□□□□ -1.53
HMGB1P1-201ENST00000522557 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.49□□□□□ -1.53
HMGB1P1-201ENST00000522557 COL15A1P39059 1388 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 TRGV11A0A075B6L2 103 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 PRAMEF33A0A0G2JMD5 474 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 EYA2O00167 538 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 PRAMEF10O60809 474 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 PPFIA2O75334 1257 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 VPS4BO75351 444 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 TPH1P17752 444 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 CHRM3P20309 590 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 ATICP31939 592 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 FPGSQ05932 587 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 ZNF844Q08AG5 666 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 ATP1A4Q13733 1029 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 HLXQ14774 488 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 ZNF169Q14929 603 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 SF3B3Q15393 1217 aaKnown RBP5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 MGAT5BQ3V5L5 792 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 GGT6Q6P531 493 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 MOGAT3Q86VF5 341 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 ZNF575Q86XF7 245 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 ANKRD18AQ8IVF6 992 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 ADGRG5Q8IZF4 528 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 LNX2Q8N448 690 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 SSH3Q8TE77 659 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 TMEM125Q96AQ2 219 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 PTDSS2Q9BVG9 487 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 TTYH3Q9C0H2 523 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 PABPC3Q9H361 631 aaKnown RBP5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 KCTD5Q9NXV2 234 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 LRFN1Q9P244 771 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 NDRG4Q9ULP0 352 aaKnown RBP5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 RAD54BQ9Y620 910 aa5.48□□□□□ -1.53
HMGB1P1-201ENST00000522557 GXYLT2A0PJZ3 443 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 FAM90A18PA6NE21 464 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 FAM90A16PA6NEW6 464 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 FAM90A9PA6NNJ1 464 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 FAM90A5PA8MXJ8 464 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 B9A039 149 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 AGPSO00116 658 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 NPHP1O15259 732 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 FAM90A15PP0C7V4 464 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 FAM90A14PP0C7W9 464 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 CKMT1AP12532 417 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 PXNP49023 591 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 SIM1P81133 766 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 DYRK1AQ13627 763 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 PTCHD3Q3KNS1 767 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 INTS11Q5TA45 600 aaKnown RBP5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 STRIP1Q5VSL9 837 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 CCDC70Q6NSX1 233 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 MMS22LQ6ZRQ5 1243 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 CLNKQ7Z7G1 428 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 SLC30A5Q8TAD4 765 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 THAP4Q8WY91 577 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 FSCN3Q9NQT6 498 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 RRN3Q9NYV6 651 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 FOXJ2Q9P0K8 574 aa5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 HERC5Q9UII4 1024 aaKnown RBP5.47□□□□□ -1.53
HMGB1P1-201ENST00000522557 TISP43B9A030 160 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 PRRT4C9JH25 899 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 hCG_1984214I3L0E3 225 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 MGST3O14880 152 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 WDHD1O75717 1129 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 IDEP14735 1019 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 ADD2P35612 726 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 BCAT1P54687 386 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 RPS7P62081 194 aaKnown RBP5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 MAPRE1Q15691 268 aaKnown RBP5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 FAXCQ5TGI0 409 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 SULT6B1Q6IMI4 303 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 DPY19L2P1Q6NXN4 242 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 MZT2AQ6P582 158 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 TMEM108Q6UXF1 575 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 SLC30A10Q6XR72 485 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 GATAD2AQ86YP4 633 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 TMTC1Q8IUR5 882 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 CPOQ8IVL8 374 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 SLC44A2Q8IWA5 706 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 FAM9AQ8IZU1 332 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 TEX19Q8NA77 164 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 MBD3L2Q8NHZ7 208 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 RILPL2Q969X0 211 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 ZNF668Q96K58 619 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 GGA3Q9NZ52 723 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 PNMA2Q9UL42 364 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 HPSEQ9Y251 543 aa5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 MRPS17Q9Y2R5 130 aaKnown RBP5.46□□□□□ -1.54
HMGB1P1-201ENST00000522557 IRAK2O43187 625 aa5.45□□□□□ -1.54
HMGB1P1-201ENST00000522557 PIAS2O75928 621 aa5.45□□□□□ -1.54
HMGB1P1-201ENST00000522557 AGR2O95994 175 aa5.45□□□□□ -1.54
HMGB1P1-201ENST00000522557 ANXA6P08133 673 aa5.45□□□□□ -1.54
HMGB1P1-201ENST00000522557 ITGA2BP08514 1039 aa5.45□□□□□ -1.54
HMGB1P1-201ENST00000522557 RARRES1P49788 294 aa5.45□□□□□ -1.54
HMGB1P1-201ENST00000522557 CDK7P50613 346 aa5.45□□□□□ -1.54
HMGB1P1-201ENST00000522557 POLE2P56282 527 aa5.45□□□□□ -1.54
HMGB1P1-201ENST00000522557 MRPS35P82673 323 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms