RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 ORC1Q13415 861 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 MAPRE1Q15691 268 aaKnown RBP7.2□□□□□ -1.26
SPIDR-218ENST00000522222 ZSCAN26Q16670 478 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 DDR2Q16832 855 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 SGSM1Q2NKQ1 1148 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 CCDC40Q4G0X9 1142 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 CBWD6Q4V339 395 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 CBWD3Q5JTY5 395 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 FAM78AQ5JUQ0 283 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 MIIPQ5JXC2 388 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 CBWD5Q5RIA9 395 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 CCDC181Q5TID7 509 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 KRT39Q6A163 491 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 EMBQ6PCB8 327 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 CACNA2D4Q7Z3S7 1137 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 DNAJB7Q7Z6W7 309 aaPredicted RBP7.2□□□□□ -1.26
SPIDR-218ENST00000522222 FAM35AQ86V20 835 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 SCN4BQ8IWT1 228 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 SLC44A3Q8N4M1 653 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 EIF1ADQ8N9N8 165 aaKnown RBP7.2□□□□□ -1.26
SPIDR-218ENST00000522222 MYCBPAPQ8TBZ2 947 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 COG1Q8WTW3 980 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 SEMA4DQ92854 862 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 NXPE3Q969Y0 559 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 SLC35C1Q96A29 364 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 PCED1BQ96HM7 432 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 ZSWIM3Q96MP5 696 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 ASB16Q96NS5 453 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 NOX5Q96PH1 765 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 GCNAQ96QF7 691 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 PNKPQ96T60 521 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 CHP1Q99653 195 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 RHOXF2Q9BQY4 288 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 RPP25Q9BUL9 199 aaKnown RBP7.2□□□□□ -1.26
SPIDR-218ENST00000522222 BCO2Q9BYV7 579 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 ZNF518BQ9C0D4 1074 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 SLITRK6Q9H5Y7 841 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 TMEM30AQ9NV96 361 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 VPS18Q9P253 973 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 ARMCX3Q9UH62 379 aaPredicted RBP7.2□□□□□ -1.26
SPIDR-218ENST00000522222 SNX12Q9UMY4 172 aa7.2□□□□□ -1.26
SPIDR-218ENST00000522222 REXO2Q9Y3B8 237 aaKnown RBP7.2□□□□□ -1.26
SPIDR-218ENST00000522222 BZW2Q9Y6E2 419 aaKnown RBP7.2□□□□□ -1.26
SPIDR-218ENST00000522222 OBSL1O75147 1896 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 KMT2EQ8IZD2 1858 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 NUP210Q8TEM1 1887 aaPredicted RBP7.19□□□□□ -1.26
SPIDR-218ENST00000522222 COL4A3Q01955 1670 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 COL4A2P08572 1712 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 ERICH4A6NGS2 130 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 SLC38A8A6NNN8 435 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 BTNL10A8MVZ5 291 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 GOLGA8KD6RF30 607 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 CLDN5O00501 218 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 ECI2O75521 394 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 NOL4O94818 638 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 PRAMEF12O95522 483 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 FGF19O95750 216 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 ATP1A1P05023 1023 aaKnown RBP7.19□□□□□ -1.26
SPIDR-218ENST00000522222 SERPING1P05155 500 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 CFHP08603 1231 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 CCDC130P13994 396 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 PTPN1P18031 435 aaKnown RBP7.19□□□□□ -1.26
SPIDR-218ENST00000522222 CD58P19256 250 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 CDC25CP30307 473 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 TNNT3P45378 269 aaPredicted RBP7.19□□□□□ -1.26
SPIDR-218ENST00000522222 LMAN1P49257 510 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 KIF11P52732 1056 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 NDST1P52848 882 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 INCA1Q0VD86 236 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 GRM2Q14416 872 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 TAF12Q16514 161 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 ARHGAP15Q53QZ3 475 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 GPR158Q5T848 1215 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 ALS2CLQ60I27 953 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 VSTM1Q6UX27 236 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 TMEM150AQ86TG1 271 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 ACOT1Q86TX2 421 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 FBXL13Q8NEE6 735 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 ZSCAN18Q8TBC5 510 aaPredicted RBP7.19□□□□□ -1.26
SPIDR-218ENST00000522222 SMARCD2Q92925 531 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 RSPRY1Q96DX4 576 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 TWNKQ96RR1 684 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 RUFY1Q96T51 708 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 TMEM121BQ9BXQ6 578 aaPredicted RBP7.19□□□□□ -1.26
SPIDR-218ENST00000522222 B3GNT5Q9BYG0 378 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 ELOVL4Q9GZR5 314 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 ATXN3LQ9H3M9 355 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 CYP3A43Q9HB55 503 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 METTL14Q9HCE5 456 aaKnown RBP7.19□□□□□ -1.26
SPIDR-218ENST00000522222 KRT82Q9NSB4 513 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 FAM49BQ9NUQ9 324 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 RAPGEFL1Q9UHV5 662 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 FBXL21Q9UKT6 434 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 MAGED2Q9UNF1 606 aaPredicted RBP7.19□□□□□ -1.26
SPIDR-218ENST00000522222 SIK3Q9Y2K2 1263 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 PCDHA13Q9Y5I0 950 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 PATJQ8NI35 1801 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 MUC6Q6W4X9 2439 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 TRIOO75962 3097 aa7.19□□□□□ -1.26
SPIDR-218ENST00000522222 KIF26AQ9ULI4 1882 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms