RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 DGKKQ5KSL6 1271 aa9.96□□□□□ -0.82
CLK4-209ENST00000521621 ZNF852Q6ZMS4 543 aa9.96□□□□□ -0.82
CLK4-209ENST00000521621 ARCQ7LC44 396 aa9.96□□□□□ -0.82
CLK4-209ENST00000521621 GPRIN1Q7Z2K8 1008 aa9.96□□□□□ -0.82
CLK4-209ENST00000521621 SCD5Q86SK9 330 aa9.96□□□□□ -0.82
CLK4-209ENST00000521621 ZDHHC17Q8IUH5 632 aa9.96□□□□□ -0.82
CLK4-209ENST00000521621 CCDC105Q8IYK2 499 aa9.96□□□□□ -0.82
CLK4-209ENST00000521621 CPA6Q8N4T0 437 aa9.96□□□□□ -0.82
CLK4-209ENST00000521621 PJA1Q8NG27 643 aa9.96□□□□□ -0.82
CLK4-209ENST00000521621 ZNF606Q8WXB4 792 aa9.96□□□□□ -0.82
CLK4-209ENST00000521621 KAT5Q92993 513 aa9.96□□□□□ -0.82
CLK4-209ENST00000521621 ATP2A3Q93084 1043 aa9.96□□□□□ -0.82
CLK4-209ENST00000521621 ELMO3Q96BJ8 720 aa9.96□□□□□ -0.82
CLK4-209ENST00000521621 MARK1Q9P0L2 795 aa9.96□□□□□ -0.82
CLK4-209ENST00000521621 GMIPQ9P107 970 aa9.96□□□□□ -0.82
CLK4-209ENST00000521621 C2orf78A6NCI8 922 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 LEFTY2O00292 366 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 TULP1O00294 542 aaPredicted RBP9.95□□□□□ -0.82
CLK4-209ENST00000521621 TRDMT1O14717 391 aaKnown RBP9.95□□□□□ -0.82
CLK4-209ENST00000521621 NCAM2O15394 837 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 COCHO43405 550 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 AVPR2P30518 371 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 GDI1P31150 447 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 ZNF445P59923 1031 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 PTK2Q05397 1052 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 LRMPQ12912 555 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 EML3Q32P44 896 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 ITPRIPL2Q3MIP1 535 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 ZNF528Q3MIS6 628 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 RRAGAQ7L523 313 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 SCAMP5Q8TAC9 235 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 CSGALNACT1Q8TDX6 532 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 DCLK3Q9C098 648 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 LTB4R2Q9NPC1 389 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 RTN4Q9NQC3 1192 aaKnown RBP9.95□□□□□ -0.82
CLK4-209ENST00000521621 FBXL21Q9UKT6 434 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 HBS1LQ9Y450 684 aaKnown RBP9.95□□□□□ -0.82
CLK4-209ENST00000521621 MIA3Q5JRA6 1907 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 EYSQ5T1H1 3165 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 GALR2O43603 387 aaPredicted RBP9.95□□□□□ -0.82
CLK4-209ENST00000521621 SP100P23497 879 aaPredicted RBP9.95□□□□□ -0.82
CLK4-209ENST00000521621 GNA15P30679 374 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 ATP5C1P36542 298 aaKnown RBP9.95□□□□□ -0.82
CLK4-209ENST00000521621 GABRB2P47870 512 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 GSCP56915 257 aaPredicted RBP9.95□□□□□ -0.82
CLK4-209ENST00000521621 DAOAP59103 153 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 GOLGA8FQ08AF8 430 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 GOLGA8DPQ0D2H9 430 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 ORC1Q13415 861 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 PPP1R2P3Q6NXS1 205 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 Q6ZNB5 142 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 ARL14EPQ8N8R7 260 aaPredicted RBP9.95□□□□□ -0.82
CLK4-209ENST00000521621 ZNF397Q8NF99 534 aaPredicted RBP9.95□□□□□ -0.82
CLK4-209ENST00000521621 CCDC26Q8TAB7 109 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 SECISBP2LQ93073 1101 aaKnown RBP9.95□□□□□ -0.82
CLK4-209ENST00000521621 PLD4Q96BZ4 506 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 RNF38Q9H0F5 515 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 SLITRK6Q9H5Y7 841 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 TBC1D17Q9HA65 648 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 HPS4Q9NQG7 708 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 ABCC13Q9NSE7 274 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 DNMT3LQ9UJW3 386 aa9.95□□□□□ -0.82
CLK4-209ENST00000521621 A0A1B0GTH6 734 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 F8VZ95 297 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 CLSTN1O94985 981 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 NFATC1O95644 943 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 CFHP08603 1231 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 CLCN1P35523 988 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 ZNF165P49910 485 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 TKTL1P51854 596 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 FZD5Q13467 585 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 RUNX3Q13761 415 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 LRRC32Q14392 662 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 RNF43Q68DV7 783 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 SIX5Q8N196 739 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 KCNV2Q8TDN2 545 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 SH3RF2Q8TEC5 729 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 SMOC2Q9H3U7 446 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 HOXC11O43248 304 aaPredicted RBP9.94□□□□□ -0.82
CLK4-209ENST00000521621 TLR5O60602 858 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 IGLV3-27P01718 113 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 CKMP06732 381 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 HOXA6P31267 233 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 YWHAGP61981 247 aaKnown RBP eCLIP9.94□□□□□ -0.82
CLK4-209ENST00000521621 TPM4P67936 248 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 COG7P83436 770 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 RING1Q06587 406 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 NR1H3Q13133 447 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 ZSCAN23Q3MJ62 389 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 PREPLQ4J6C6 727 aaPredicted RBP9.94□□□□□ -0.82
CLK4-209ENST00000521621 ZNF394Q53GI3 561 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 TRIM72Q6ZMU5 477 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 CPXM2Q8N436 756 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 AOPEPQ8N6M6 819 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 DDX1Q92499 740 aaKnown RBP9.94□□□□□ -0.82
CLK4-209ENST00000521621 SLC22A12Q96S37 553 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 MIS12Q9H081 205 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 LRRC4Q9HBW1 653 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 OSER1Q9NX31 292 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 TAB2Q9NYJ8 693 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms