RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 HPS3Q969F9 1004 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 HOOK2Q96ED9 719 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 TEX13AQ9BXU3 409 aaPredicted RBP3.93□□□□□ -1.78
VPS13B-209ENST00000521559 SMOC2Q9H3U7 446 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 ARHGEF3Q9NR81 526 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 TSPYL4Q9UJ04 414 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 ST3GAL5Q9UNP4 418 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 AGAP1Q9UPQ3 857 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 STXBP5LQ9Y2K9 1186 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 PLEKHM1Q9Y4G2 1056 aa3.93□□□□□ -1.78
VPS13B-209ENST00000521559 LAS1LQ9Y4W2 734 aaKnown RBP3.93□□□□□ -1.78
VPS13B-209ENST00000521559 LRRC37A3O60309 1634 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 PALLDQ8WX93 1383 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 RGPD5Q99666 1765 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 ALDH1L1O75891 902 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 STARD3NLO95772 234 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 AHSGP02765 367 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 THP07101 528 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 FAM163BP0C2L3 166 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 PIM1P11309 404 aaPredicted RBP3.92□□□□□ -1.78
VPS13B-209ENST00000521559 XRCC6P12956 609 aaKnown RBP eCLIP3.92□□□□□ -1.78
VPS13B-209ENST00000521559 HSPA6P17066 643 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 CHRM3P20309 590 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 CCT8P50990 548 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 SOX8P57073 446 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 LOXL3P58215 753 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 EXOSC9Q06265 439 aaKnown RBP3.92□□□□□ -1.78
VPS13B-209ENST00000521559 ITPK1Q13572 414 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 PLS1Q14651 629 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 ANKRD16Q6P6B7 361 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 TMEM108Q6UXF1 575 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 ZNF804AQ7Z570 1209 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 WDR53Q7Z5U6 358 aaPredicted RBP3.92□□□□□ -1.78
VPS13B-209ENST00000521559 DTX2Q86UW9 622 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 RASAL3Q86YV0 1011 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 GRAMD1CQ8IYS0 662 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 STAG1Q8WVM7 1258 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 RFKQ969G6 155 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 MYH16Q9H6N6 1097 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 SERTAD4Q9NUC0 356 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 HESX1Q9UBX0 185 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 CCNL1Q9UK58 526 aaPredicted RBP3.92□□□□□ -1.78
VPS13B-209ENST00000521559 PADI4Q9UM07 663 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 SH2B3Q9UQQ2 575 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 FRMD4BQ9Y2L6 1034 aa3.92□□□□□ -1.78
VPS13B-209ENST00000521559 PARP4Q9UKK3 1724 aaKnown RBP3.92□□□□□ -1.78
VPS13B-209ENST00000521559 HEG1Q9ULI3 1381 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 POLR2AP24928 1970 aaKnown RBP3.91□□□□□ -1.78
VPS13B-209ENST00000521559 MYO1CO00159 1063 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 SLC16A3O15427 465 aaKnown RBP3.91□□□□□ -1.78
VPS13B-209ENST00000521559 MARCH6O60337 910 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 ABLIM3O94929 683 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 A1BGP04217 495 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 PRKCGP05129 697 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 RHOP08100 348 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 HOXB7P09629 217 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 EBLN1P0CF75 366 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 CYP19A1P11511 503 aaPredicted RBP3.91□□□□□ -1.78
VPS13B-209ENST00000521559 CYP2C9P11712 490 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 PPIFP30405 207 aaKnown RBP3.91□□□□□ -1.78
VPS13B-209ENST00000521559 VIPR2P41587 438 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 PXNP49023 591 aaPredicted RBP3.91□□□□□ -1.78
VPS13B-209ENST00000521559 SLC10A2Q12908 348 aaPredicted RBP3.91□□□□□ -1.78
VPS13B-209ENST00000521559 FGL2Q14314 439 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 CEP85Q6P2H3 762 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 SRRM1Q8IYB3 904 aaKnown RBP3.91□□□□□ -1.78
VPS13B-209ENST00000521559 CAMKK1Q8N5S9 505 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 C8orf58Q8NAV2 365 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 KLHDC4Q8TBB5 520 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 TBC1D5Q92609 795 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 TSR2Q969E8 191 aaKnown RBP3.91□□□□□ -1.78
VPS13B-209ENST00000521559 AIFM3Q96NN9 605 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 SLC46A1Q96NT5 459 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 CGRRF1Q99675 332 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 PTDSS2Q9BVG9 487 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 CHMP4AQ9BY43 222 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 TTYH3Q9C0H2 523 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 METTL14Q9HCE5 456 aaKnown RBP3.91□□□□□ -1.78
VPS13B-209ENST00000521559 NMRK2Q9NPI5 230 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 PIH1D1Q9NWS0 290 aaKnown RBP3.91□□□□□ -1.78
VPS13B-209ENST00000521559 TCEAL9Q9UHQ7 104 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 SHOC2Q9UQ13 582 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.91□□□□□ -1.78
VPS13B-209ENST00000521559 USP16Q9Y5T5 823 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 TNFRSF18Q9Y5U5 241 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 MRC1P22897 1456 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 SOS1Q07889 1333 aaPredicted RBP3.91□□□□□ -1.78
VPS13B-209ENST00000521559 ZBED9Q6R2W3 1325 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 FANCIQ9NVI1 1328 aa3.91□□□□□ -1.78
VPS13B-209ENST00000521559 PKD1L3Q7Z443 1732 aa3.9□□□□□ -1.78
VPS13B-209ENST00000521559 RGPD2P0DJD1 1756 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 VWC2LB2RUY7 222 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 QSOX1O00391 747 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 JTBO76095 146 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 GRPP07492 148 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 ELFN1P0C7U0 828 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 HDCP19113 662 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 DRD4P21917 467 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 ITPKBP27987 946 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 LRPAP1P30533 357 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms