RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 SLC4A11Q8NBS3 891 aa11□□□□□ -0.65
TRAPPC9-209ENST00000521167 SCAMP5Q8TAC9 235 aa11□□□□□ -0.65
TRAPPC9-209ENST00000521167 SH3RF2Q8TEC5 729 aa11□□□□□ -0.65
TRAPPC9-209ENST00000521167 OSCP1Q8WVF1 389 aa11□□□□□ -0.65
TRAPPC9-209ENST00000521167 EXOC4Q96A65 974 aa11□□□□□ -0.65
TRAPPC9-209ENST00000521167 TMEM176AQ96HP8 235 aa11□□□□□ -0.65
TRAPPC9-209ENST00000521167 NT5C1BQ96P26 610 aa11□□□□□ -0.65
TRAPPC9-209ENST00000521167 DUSP16Q9BY84 665 aa11□□□□□ -0.65
TRAPPC9-209ENST00000521167 RNF38Q9H0F5 515 aa11□□□□□ -0.65
TRAPPC9-209ENST00000521167 CHRDQ9H2X0 955 aa11□□□□□ -0.65
TRAPPC9-209ENST00000521167 HPS4Q9NQG7 708 aa11□□□□□ -0.65
TRAPPC9-209ENST00000521167 SPATA6Q9NWH7 488 aaPredicted RBP11□□□□□ -0.65
TRAPPC9-209ENST00000521167 DUS2Q9NX74 493 aaKnown RBP11□□□□□ -0.65
TRAPPC9-209ENST00000521167 CHORDC1Q9UHD1 332 aaPredicted RBP11□□□□□ -0.65
TRAPPC9-209ENST00000521167 TSR3Q9UJK0 312 aaKnown RBP11□□□□□ -0.65
TRAPPC9-209ENST00000521167 FBXO4Q9UKT5 387 aa11□□□□□ -0.65
TRAPPC9-209ENST00000521167 KIAA1257Q9ULG3 409 aa11□□□□□ -0.65
TRAPPC9-209ENST00000521167 NDRG2Q9UN36 371 aaKnown RBP11□□□□□ -0.65
TRAPPC9-209ENST00000521167 HHLA1C9JL84 531 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 LEFTY2O00292 366 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 SLC9A3R1O14745 358 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 LAMTOR5O43504 91 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 CHRNB1P11230 501 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 SOX9P48436 509 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 IFNAR2P48551 515 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 MRE11P49959 708 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 TNK2Q07912 1038 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 KCNH2Q12809 1159 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 IFRD2Q12894 506 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 ZNF394Q53GI3 561 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 CPA6Q8N4T0 437 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 ZNF276Q8N554 614 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 UBR7Q8N806 425 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 EHBP1Q8NDI1 1231 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 ATP2A3Q93084 1043 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 GBP4Q96PP9 640 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 SEMA4AQ9H3S1 761 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 EBF3Q9H4W6 596 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 TLR8Q9NR97 1041 aaKnown RBP10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 LMBRD1Q9NUN5 540 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 FAM86C1Q9NVL1 165 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 SCML2Q9UQR0 700 aa10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 EP300Q09472 2414 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC9-209ENST00000521167 TRDMT1O14717 391 aaKnown RBP10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 AFPP02771 609 aaKnown RBP10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 SP9P0CG40 484 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 MBL2P11226 248 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 VDRP11473 427 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 ARSAP15289 507 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 KIF11P52732 1056 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 SLC8A3P57103 927 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 LRMPQ12912 555 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 PON2Q15165 354 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 EML3Q32P44 896 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 SGO2Q562F6 1265 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 CT47A1Q5JQC4 288 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 TRIM68Q6AZZ1 485 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 TXNDC11Q6PKC3 985 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 ALYREFQ86V81 257 aaKnown RBP10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 MAML2Q8IZL2 1156 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 ANKRD52Q8NB46 1076 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 TTC8Q8TAM2 541 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 LMO3Q8TAP4 145 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 RIN3Q8TB24 985 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 ARID3AQ99856 593 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 NUP62CLQ9H1M0 184 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 ECT2Q9H8V3 914 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 GMIPQ9P107 970 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 DACH1Q9UI36 760 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 CPQQ9Y646 472 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 USP3Q9Y6I4 520 aa10.98□□□□□ -0.65
TRAPPC9-209ENST00000521167 SPAG17Q6Q759 2223 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 E2F8A0AVK6 867 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 OTOL1A6NHN0 477 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 COCHO43405 550 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 NFATC1O95644 943 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 PAEPP09466 180 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 PRKCSHP14314 528 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 ACO1P21399 889 aaKnown RBP10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 ERCC5P28715 1186 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 GJA4P35212 333 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 ZXDBP98169 803 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 GCNT1Q02742 428 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 MTAPQ13126 283 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 CCINQ13939 588 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 PPP2R5DQ14738 602 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 SMYD5Q6GMV2 418 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 KLHDC10Q6PID8 442 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 ZC3H14Q6PJT7 736 aaKnown RBP10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 CCDC186Q7Z3E2 898 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 ADGRG2Q8IZP9 1017 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 SPEM1Q8N4L4 309 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 JAKMIP2Q96AA8 810 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 OTUB2Q96DC9 234 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 PHOX2BQ99453 314 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 FAM126AQ9BYI3 521 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 LINC00597Q9H2U6 94 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 CYLDQ9NQC7 956 aa10.97□□□□□ -0.65
TRAPPC9-209ENST00000521167 TBC1D14Q9P2M4 693 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms