RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 COG1Q8WTW3 980 aa15.77■□□□□ 0.12
SREK1-209ENST00000520953 EDEM1Q92611 657 aa15.77■□□□□ 0.12
SREK1-209ENST00000520953 ACSF2Q96CM8 615 aaPredicted RBP15.77■□□□□ 0.12
SREK1-209ENST00000520953 C8orf48Q96LL4 319 aa15.77■□□□□ 0.12
SREK1-209ENST00000520953 TGS1Q96RS0 853 aaKnown RBP15.77■□□□□ 0.12
SREK1-209ENST00000520953 PLVAPQ9BX97 442 aa15.77■□□□□ 0.12
SREK1-209ENST00000520953 PARD6BQ9BYG5 372 aa15.77■□□□□ 0.12
SREK1-209ENST00000520953 UBXN6Q9BZV1 441 aa15.77■□□□□ 0.12
SREK1-209ENST00000520953 TLR9Q9NR96 1032 aa15.77■□□□□ 0.12
SREK1-209ENST00000520953 SMARCAL1Q9NZC9 954 aa15.77■□□□□ 0.12
SREK1-209ENST00000520953 EHD2Q9NZN4 543 aa15.77■□□□□ 0.12
SREK1-209ENST00000520953 AFF4Q9UHB7 1163 aaKnown RBP15.77■□□□□ 0.12
SREK1-209ENST00000520953 NAALADL1Q9UQQ1 740 aa15.77■□□□□ 0.12
SREK1-209ENST00000520953 USP3Q9Y6I4 520 aa15.77■□□□□ 0.12
SREK1-209ENST00000520953 MYO16Q9Y6X6 1858 aa15.77■□□□□ 0.12
SREK1-209ENST00000520953 GREB1Q4ZG55 1949 aa15.77■□□□□ 0.12
SREK1-209ENST00000520953 C2orf71A6NGG8 1288 aa15.77■□□□□ 0.11
SREK1-209ENST00000520953 RFXAPO00287 272 aa15.77■□□□□ 0.11
SREK1-209ENST00000520953 TGM5O43548 720 aa15.77■□□□□ 0.11
SREK1-209ENST00000520953 ATF2P15336 505 aa15.77■□□□□ 0.11
SREK1-209ENST00000520953 PDGFRAP16234 1089 aa15.77■□□□□ 0.11
SREK1-209ENST00000520953 ERVK-21P61565 698 aa15.77■□□□□ 0.11
SREK1-209ENST00000520953 ATP11AP98196 1134 aa15.77■□□□□ 0.11
SREK1-209ENST00000520953 AADACL2Q6P093 401 aa15.77■□□□□ 0.11
SREK1-209ENST00000520953 DEFB106AQ8N104 65 aa15.77■□□□□ 0.11
SREK1-209ENST00000520953 ARNTL2Q8WYA1 636 aa15.77■□□□□ 0.11
SREK1-209ENST00000520953 ALG3Q92685 438 aa15.77■□□□□ 0.11
SREK1-209ENST00000520953 CD101Q93033 1021 aa15.77■□□□□ 0.11
SREK1-209ENST00000520953 KLHL5Q96PQ7 755 aa15.77■□□□□ 0.11
SREK1-209ENST00000520953 SAR1BQ9Y6B6 198 aa15.77■□□□□ 0.11
SREK1-209ENST00000520953 SPTBN5Q9NRC6 3674 aaKnown RBP15.77■□□□□ 0.11
SREK1-209ENST00000520953 ZNF638Q14966 1978 aaKnown RBP15.77■□□□□ 0.11
SREK1-209ENST00000520953 C5orf42Q9H799 3197 aa15.77■□□□□ 0.11
SREK1-209ENST00000520953 ATG2AQ2TAZ0 1938 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.76■□□□□ 0.11
SREK1-209ENST00000520953 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.76■□□□□ 0.11
SREK1-209ENST00000520953 DDX3YO15523 660 aaKnown RBP15.76■□□□□ 0.11
SREK1-209ENST00000520953 SPOPO43791 374 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 ZRANB2O95218 330 aaKnown RBP eCLIP15.76■□□□□ 0.117e-7■■■□□ 18.1
SREK1-209ENST00000520953 GPD1P21695 349 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 GJC1P36383 396 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 ATP13A4Q4VNC1 1196 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 DCAF12L1Q5VU92 463 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 OTUD1Q5VV17 481 aaPredicted RBP15.76■□□□□ 0.11
SREK1-209ENST00000520953 CHRDL2Q6WN34 429 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 MRPL43Q8N983 215 aaKnown RBP15.76■□□□□ 0.11
SREK1-209ENST00000520953 ADAM32Q8TC27 787 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 MICAL1Q8TDZ2 1067 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 OXCT2Q9BYC2 517 aaPredicted RBP15.76■□□□□ 0.11
SREK1-209ENST00000520953 ANKZF1Q9H8Y5 726 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 NMUR1Q9HB89 426 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 CNGB3Q9NQW8 809 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 KLHL11Q9NVR0 708 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 OSER1Q9NX31 292 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 FAM53CQ9NYF3 392 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 FNIP2Q9P278 1114 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 IP6K2Q9UHH9 426 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 AMFRQ9UKV5 643 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 CTAGE15A4D2H0 777 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 CARNS1A5YM72 827 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 TRIM66O15016 1216 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 CTAGE8P0CG41 777 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 GPM6BQ13491 265 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 LLGL1Q15334 1064 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 PPP2R2DQ66LE6 453 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 PM20D1Q6GTS8 502 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 SCD5Q86SK9 330 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 CTAGE6Q86UF2 777 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 ZDHHC17Q8IUH5 632 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 CTAGE4Q8IX94 777 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 NUP93Q8N1F7 819 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 GDPD5Q8WTR4 605 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 HES6Q96HZ4 224 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 C11orf84Q9BUA3 381 aaPredicted RBP15.76■□□□□ 0.11
SREK1-209ENST00000520953 PNPLA8Q9NP80 782 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 NUDT5Q9UKK9 219 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 LZTS1Q9Y250 596 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 YIPF1Q9Y548 306 aa15.76■□□□□ 0.11
SREK1-209ENST00000520953 TRIOBPQ9H2D6 2365 aa15.75■□□□□ 0.11
SREK1-209ENST00000520953 LRCH4O75427 683 aa15.75■□□□□ 0.11
SREK1-209ENST00000520953 IL1R2P27930 398 aa15.75■□□□□ 0.11
SREK1-209ENST00000520953 SSR1P43307 286 aaKnown RBP15.75■□□□□ 0.11
SREK1-209ENST00000520953 ZNF143P52747 638 aaPredicted RBP15.75■□□□□ 0.11
SREK1-209ENST00000520953 RPS6KA1Q15418 735 aa15.75■□□□□ 0.11
SREK1-209ENST00000520953 DCAF6Q58WW2 860 aa15.75■□□□□ 0.11
SREK1-209ENST00000520953 CC2D1AQ6P1N0 951 aaPredicted RBP15.75■□□□□ 0.11
SREK1-209ENST00000520953 TMCO3Q6UWJ1 677 aa15.75■□□□□ 0.11
SREK1-209ENST00000520953 TDHQ8IZJ6 230 aa15.75■□□□□ 0.11
SREK1-209ENST00000520953 SYCE1Q8N0S2 351 aa15.75■□□□□ 0.11
SREK1-209ENST00000520953 C2orf15Q8WU43 125 aaKnown RBP15.75■□□□□ 0.11
SREK1-209ENST00000520953 MS4A14Q96JA4 679 aa15.75■□□□□ 0.11
SREK1-209ENST00000520953 CAPZA3Q96KX2 299 aa15.75■□□□□ 0.11
SREK1-209ENST00000520953 GMIPQ9P107 970 aa15.75■□□□□ 0.11
SREK1-209ENST00000520953 SNX12Q9UMY4 172 aa15.75■□□□□ 0.11
SREK1-209ENST00000520953 MAGED2Q9UNF1 606 aaPredicted RBP15.75■□□□□ 0.11
SREK1-209ENST00000520953 RWDD3Q9Y3V2 267 aa15.75■□□□□ 0.11
SREK1-209ENST00000520953 A0A1W2PQH9 124 aa15.75■□□□□ 0.11
SREK1-209ENST00000520953 FSCN2O14926 492 aa15.75■□□□□ 0.11
SREK1-209ENST00000520953 PER2O15055 1255 aa15.75■□□□□ 0.11
SREK1-209ENST00000520953 SEC31AO94979 1220 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms