RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SFT2D3Q587I9 215 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 SLC27A3Q5K4L6 730 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 NXNQ6DKJ4 435 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 DRICH1Q6PGQ1 229 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 NAT14Q8WUY8 206 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 GRIP2Q9C0E4 1043 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 OCEL1Q9H607 264 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 S100A14Q9HCY8 104 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 CISHQ9NSE2 258 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 GPATCH2LQ9NWQ4 482 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 FEM1BQ9UK73 627 aa13.32□□□□□ -0.28
TRAPPC9-208ENST00000520857 NOP56O00567 594 aaKnown RBP13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 DGAT1O75907 488 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 RAP1GDS1P52306 607 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 WNT7BP56706 349 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 FASTKD1Q53R41 847 aaKnown RBP13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 HPS6Q86YV9 775 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 RNF148Q8N7C7 305 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 IDI2Q9BXS1 227 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 CHCHD3Q9NX63 227 aaKnown RBP13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 TJP2Q9UDY2 1190 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 CXorf49A8MYA2 514 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 DHX15O43143 795 aaKnown RBP13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 PRPSAP2O60256 369 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 DGKIO75912 1065 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 RAD17O75943 681 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 MSX2P35548 267 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 BCAR1P56945 870 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 PRKCEQ02156 737 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 DLGAP5Q15398 846 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 ZNF699Q32M78 642 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 HSP90AA5PQ58FG0 334 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 OR6B2Q6IFH4 312 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 GSDMBQ8TAX9 411 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 SHKBP1Q8TBC3 707 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 CERKQ8TCT0 537 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 ADPGKQ9BRR6 497 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 ATXN10Q9UBB4 475 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 PLLPQ9Y342 182 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 PTPRJQ12913 1337 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 E9PBE3 544 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 H0YCG3 227 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 NEMP1O14524 444 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 KLHL41O60662 606 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 DKC1O60832 514 aaKnown RBP eCLIP13.31□□□□□ -0.284e-7■■■■■ 45.2
TRAPPC9-208ENST00000520857 HNRNPCP07910 306 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 SAT1P21673 171 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 LRRC38Q5VT99 294 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 RBM44Q6ZP01 1051 aaKnown RBP13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 BBS12Q6ZW61 710 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 ACAD11Q709F0 780 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 SLC7A3Q8WY07 619 aa13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 HBS1LQ9Y450 684 aaKnown RBP13.31□□□□□ -0.28
TRAPPC9-208ENST00000520857 DCXO43602 365 aa13.3□□□□□ -0.28
TRAPPC9-208ENST00000520857 SORBS2O94875 1100 aaKnown RBP13.3□□□□□ -0.28
TRAPPC9-208ENST00000520857 VNN1O95497 513 aa13.3□□□□□ -0.28
TRAPPC9-208ENST00000520857 UQCRBP14927 111 aa13.3□□□□□ -0.28
TRAPPC9-208ENST00000520857 IL1R2P27930 398 aa13.3□□□□□ -0.28
TRAPPC9-208ENST00000520857 TBL3Q12788 808 aaKnown RBP13.3□□□□□ -0.28
TRAPPC9-208ENST00000520857 MAP3K21Q5TCX8 1036 aa13.3□□□□□ -0.28
TRAPPC9-208ENST00000520857 CDR2LQ86X02 465 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC9-208ENST00000520857 STKLD1Q8NE28 680 aa13.3□□□□□ -0.28
TRAPPC9-208ENST00000520857 SYTL5Q8TDW5 730 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC9-208ENST00000520857 ST6GALNAC4Q9H4F1 302 aa13.3□□□□□ -0.28
TRAPPC9-208ENST00000520857 FAF1Q9UNN5 650 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC9-208ENST00000520857 TCN1P20061 433 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC9-208ENST00000520857 PMLP29590 882 aa13.3□□□□□ -0.28
TRAPPC9-208ENST00000520857 TAP1Q03518 808 aa13.3□□□□□ -0.28
TRAPPC9-208ENST00000520857 ZNF252P-AS1Q0IIN9 211 aa13.3□□□□□ -0.28
TRAPPC9-208ENST00000520857 MAN1C1Q9NR34 630 aa13.3□□□□□ -0.28
TRAPPC9-208ENST00000520857 FARP1Q9Y4F1 1045 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC9-208ENST00000520857 ATAD5Q96QE3 1844 aa13.3□□□□□ -0.28
TRAPPC9-208ENST00000520857 STRCP1A6NGW2 1772 aa13.3□□□□□ -0.28
TRAPPC9-208ENST00000520857 LRCH4O75427 683 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 SPAG6O75602 509 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 KLHL2O95198 593 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 C4BPAP04003 597 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 PSAPP07602 524 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 SRGAP2CP0DJJ0 459 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 MIPP30301 263 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 RAP1GAPP47736 663 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 SESN2P58004 480 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 TFDP2Q14188 446 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 VWA5B1Q5TIE3 1220 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 SLFN12LQ6IEE8 588 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 MASTLQ96GX5 879 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 C15orf38-AP3S2A0A0A6YYH1 394 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 POLRMTO00411 1230 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 HSPA4LO95757 839 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 CST3P01034 146 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 SERPINA6P08185 405 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 ACO1P21399 889 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 CHN2P52757 468 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 FOLH1Q04609 750 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 STRIP1Q5VSL9 837 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 DENND1BQ6P3S1 775 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 ARPINQ7Z6K5 226 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 LCA5Q86VQ0 697 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 MYLK4Q86YV6 388 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 MAP7D3Q8IWC1 876 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms