RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 MRPS17Q9Y2R5 130 aaKnown RBP17.14■□□□□ 0.33
TNPO1-212ENST00000520850 KIF26AQ9ULI4 1882 aaPredicted RBP17.14■□□□□ 0.33
TNPO1-212ENST00000520850 PES1O00541 588 aaKnown RBP17.13■□□□□ 0.33
TNPO1-212ENST00000520850 SLC9A3R1O14745 358 aaPredicted RBP17.13■□□□□ 0.33
TNPO1-212ENST00000520850 TLR5O60602 858 aa17.13■□□□□ 0.33
TNPO1-212ENST00000520850 ZBED1O96006 694 aa17.13■□□□□ 0.33
TNPO1-212ENST00000520850 ABL1P00519 1130 aa17.13■□□□□ 0.33
TNPO1-212ENST00000520850 RALAP11233 206 aa17.13■□□□□ 0.33
TNPO1-212ENST00000520850 BRD2P25440 801 aaKnown RBP17.13■□□□□ 0.33
TNPO1-212ENST00000520850 GNA15P30679 374 aa17.13■□□□□ 0.33
TNPO1-212ENST00000520850 ATP5C1P36542 298 aaKnown RBP17.13■□□□□ 0.33
TNPO1-212ENST00000520850 TKTL1P51854 596 aa17.13■□□□□ 0.33
TNPO1-212ENST00000520850 ZXDBP98169 803 aa17.13■□□□□ 0.33
TNPO1-212ENST00000520850 AMPD2Q01433 879 aa17.13■□□□□ 0.33
TNPO1-212ENST00000520850 MTF1Q14872 753 aa17.13■□□□□ 0.33
TNPO1-212ENST00000520850 ARHGAP44Q17R89 818 aa17.13■□□□□ 0.33
TNPO1-212ENST00000520850 ZNF852Q6ZMS4 543 aa17.13■□□□□ 0.33
TNPO1-212ENST00000520850 RALGPS2Q86X27 583 aaPredicted RBP17.13■□□□□ 0.33
TNPO1-212ENST00000520850 UBA3Q8TBC4 463 aa17.13■□□□□ 0.33
TNPO1-212ENST00000520850 SH3RF2Q8TEC5 729 aa17.13■□□□□ 0.33
TNPO1-212ENST00000520850 IRGQQ8WZA9 623 aa17.13■□□□□ 0.33
TNPO1-212ENST00000520850 OTUB2Q96DC9 234 aa17.13■□□□□ 0.33
TNPO1-212ENST00000520850 SMG9Q9H0W8 520 aaKnown RBP17.13■□□□□ 0.33
TNPO1-212ENST00000520850 SIK3Q9Y2K2 1263 aa17.13■□□□□ 0.33
TNPO1-212ENST00000520850 E2F8A0AVK6 867 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 SHISA7A6NL88 538 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 LEFTY2O00292 366 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 CYP26A1O43174 497 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 FBXO21O94952 628 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 PDGFBP01127 241 aaPredicted RBP17.12■□□□□ 0.33
TNPO1-212ENST00000520850 CLCN1P35523 988 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 MAGEA9P43362 315 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 ACADSBP45954 432 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 APBA1Q02410 837 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 RUNX3Q13761 415 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 DRAP1Q14919 205 aaPredicted RBP17.12■□□□□ 0.33
TNPO1-212ENST00000520850 ITPRIPL2Q3MIP1 535 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 ZSCAN23Q3MJ62 389 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 CWF19L1Q69YN2 538 aaKnown RBP17.12■□□□□ 0.33
TNPO1-212ENST00000520850 PMF1Q6P1K2 205 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 SCD5Q86SK9 330 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 TMEM110Q86TL2 294 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 GPIHBP1Q8IV16 184 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 ZFRQ96KR1 1074 aaKnown RBP17.12■□□□□ 0.33
TNPO1-212ENST00000520850 CCSER2Q9H7U1 834 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 TBC1D17Q9HA65 648 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 NMUR1Q9HB89 426 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 HEBP1Q9NRV9 189 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 OSER1Q9NX31 292 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 TBC1D14Q9P2M4 693 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 DNMT3LQ9UJW3 386 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 SIT1Q9Y3P8 196 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 CPQQ9Y646 472 aa17.12■□□□□ 0.33
TNPO1-212ENST00000520850 COL4A2P08572 1712 aa17.11■□□□□ 0.33
TNPO1-212ENST00000520850 A0A1W2PQH9 124 aa17.11■□□□□ 0.33
TNPO1-212ENST00000520850 M0QYV0 167 aa17.11■□□□□ 0.33
TNPO1-212ENST00000520850 TULP2O00295 520 aa17.11■□□□□ 0.33
TNPO1-212ENST00000520850 NCAM2O15394 837 aa17.11■□□□□ 0.33
TNPO1-212ENST00000520850 MBL2P11226 248 aaPredicted RBP17.11■□□□□ 0.33
TNPO1-212ENST00000520850 RARGP13631 454 aa17.11■□□□□ 0.33
TNPO1-212ENST00000520850 PGFP49763 221 aa17.11■□□□□ 0.33
TNPO1-212ENST00000520850 UBXN1Q04323 297 aa17.11■□□□□ 0.33
TNPO1-212ENST00000520850 IER5LQ5T953 404 aa17.11■□□□□ 0.33
TNPO1-212ENST00000520850 MAMSTRQ6ZN01 415 aa17.11■□□□□ 0.33
TNPO1-212ENST00000520850 BEND5Q7L4P6 421 aa17.11■□□□□ 0.33
TNPO1-212ENST00000520850 ADGRG2Q8IZP9 1017 aa17.11■□□□□ 0.33
TNPO1-212ENST00000520850 ZNF687Q8N1G0 1237 aa17.11■□□□□ 0.33
TNPO1-212ENST00000520850 RIN3Q8TB24 985 aa17.11■□□□□ 0.33
TNPO1-212ENST00000520850 SECISBP2LQ93073 1101 aaKnown RBP17.11■□□□□ 0.33
TNPO1-212ENST00000520850 ATP2A3Q93084 1043 aa17.11■□□□□ 0.33
TNPO1-212ENST00000520850 CLDN23Q96B33 292 aa17.11■□□□□ 0.33
TNPO1-212ENST00000520850 LSM14BQ9BX40 385 aaKnown RBP17.11■□□□□ 0.33
TNPO1-212ENST00000520850 KLF16Q9BXK1 252 aaPredicted RBP17.11■□□□□ 0.33
TNPO1-212ENST00000520850 SLC4A5Q9BY07 1137 aa17.11■□□□□ 0.33
TNPO1-212ENST00000520850 GANQ9H2C0 597 aa17.11■□□□□ 0.33
TNPO1-212ENST00000520850 RTN4Q9NQC3 1192 aaKnown RBP17.11■□□□□ 0.33
TNPO1-212ENST00000520850 DUS2Q9NX74 493 aaKnown RBP17.11■□□□□ 0.33
TNPO1-212ENST00000520850 HELZP42694 1942 aaKnown RBP17.11■□□□□ 0.33
TNPO1-212ENST00000520850 SART1O43290 800 aaKnown RBP17.1■□□□□ 0.33
TNPO1-212ENST00000520850 THAP12O43422 761 aa17.1■□□□□ 0.33
TNPO1-212ENST00000520850 GABBR2O75899 941 aa17.1■□□□□ 0.33
TNPO1-212ENST00000520850 ATP1A3P13637 1013 aa17.1■□□□□ 0.33
TNPO1-212ENST00000520850 RPS9P46781 194 aaKnown RBP17.1■□□□□ 0.33
TNPO1-212ENST00000520850 YWHAGP61981 247 aaKnown RBP eCLIP17.1■□□□□ 0.33
TNPO1-212ENST00000520850 COG7P83436 770 aa17.1■□□□□ 0.33
TNPO1-212ENST00000520850 GOLGA8FQ08AF8 430 aa17.1■□□□□ 0.33
TNPO1-212ENST00000520850 GOLGA8DPQ0D2H9 430 aa17.1■□□□□ 0.33
TNPO1-212ENST00000520850 NR1H3Q13133 447 aa17.1■□□□□ 0.33
TNPO1-212ENST00000520850 EML3Q32P44 896 aa17.1■□□□□ 0.33
TNPO1-212ENST00000520850 HTR3DQ70Z44 454 aa17.1■□□□□ 0.33
TNPO1-212ENST00000520850 BHLHA9Q7RTU4 235 aa17.1■□□□□ 0.33
TNPO1-212ENST00000520850 ZNF677Q86XU0 584 aa17.1■□□□□ 0.33
TNPO1-212ENST00000520850 SIX6OS1Q8N1H7 587 aa17.1■□□□□ 0.33
TNPO1-212ENST00000520850 PJA1Q8NG27 643 aa17.1■□□□□ 0.33
TNPO1-212ENST00000520850 ULBP1Q9BZM6 244 aa17.1■□□□□ 0.33
TNPO1-212ENST00000520850 LTB4R2Q9NPC1 389 aa17.1■□□□□ 0.33
TNPO1-212ENST00000520850 HPS4Q9NQG7 708 aa17.1■□□□□ 0.33
TNPO1-212ENST00000520850 ABCC13Q9NSE7 274 aa17.1■□□□□ 0.33
TNPO1-212ENST00000520850 OLA1Q9NTK5 396 aaKnown RBP17.1■□□□□ 0.33
TNPO1-212ENST00000520850 NAGPAQ9UK23 515 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms