RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 FMNL3Q8IVF7 1028 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 RGL4Q8IZJ4 473 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 ZNF513Q8N8E2 541 aaPredicted RBP8.54□□□□□ -1.04
CSMD1-209ENST00000520630 CXorf38Q8TB03 319 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 IPO4Q8TEX9 1081 aaKnown RBP8.54□□□□□ -1.04
CSMD1-209ENST00000520630 SPIRE2Q8WWL2 714 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 KCNN1Q92952 543 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 FAM84AQ96KN4 292 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 ZFRQ96KR1 1074 aaKnown RBP8.54□□□□□ -1.04
CSMD1-209ENST00000520630 TIGD1Q96MW7 591 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 ANP32EQ9BTT0 268 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 CLMPQ9H6B4 373 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 TMEM30AQ9NV96 361 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 FAM13BQ9NYF5 915 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 GMIPQ9P107 970 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 GTF3C4Q9UKN8 822 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 L1RE1Q9UN81 338 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 STARD13Q9Y3M8 1113 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 RAD54BQ9Y620 910 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 SPENQ96T58 3664 aaKnown RBP8.53□□□□□ -1.04
CSMD1-209ENST00000520630 A0A0B4J269 797 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 NPHP3-ACAD11A0A0J9YXS1 232 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 MYMKA6NI61 221 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 TISP43B9A030 160 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 WASH3PC4AMC7 463 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 OGTO15294 1046 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 ACTN4O43707 911 aaKnown RBP8.53□□□□□ -1.04
CSMD1-209ENST00000520630 ATP2C2O75185 946 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 TULP3O75386 442 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 KRT10P13645 584 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 HOXB2P14652 356 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 CCT6AP40227 531 aaKnown RBP8.53□□□□□ -1.04
CSMD1-209ENST00000520630 SYKP43405 635 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 RAD51AP2Q09MP3 1159 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 E2F4Q16254 413 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 KCNT1Q5JUK3 1230 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 LY6G5CQ5SRR4 150 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 CRELD2Q6UXH1 353 aaPredicted RBP8.53□□□□□ -1.04
CSMD1-209ENST00000520630 DCP1BQ8IZD4 617 aaKnown RBP8.53□□□□□ -1.04
CSMD1-209ENST00000520630 GALNT15Q8N3T1 639 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 PDCL2Q8N4E4 241 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 ZCCHC9Q8N567 271 aaKnown RBP8.53□□□□□ -1.04
CSMD1-209ENST00000520630 NAT16Q8N8M0 369 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 RHBDD1Q8TEB9 315 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 MRGPRX1Q96LB2 322 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 AK8Q96MA6 479 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 GABRG3Q99928 467 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 PANK2Q9BZ23 570 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 ZDHHC5Q9C0B5 715 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 GZF1Q9H116 711 aaPredicted RBP8.53□□□□□ -1.04
CSMD1-209ENST00000520630 NUP62CLQ9H1M0 184 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 IKZF4Q9H2S9 585 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 FAM124BQ9H5Z6 455 aaPredicted RBP8.53□□□□□ -1.04
CSMD1-209ENST00000520630 WSB2Q9NYS7 404 aaPredicted RBP8.53□□□□□ -1.04
CSMD1-209ENST00000520630 UXTQ9UBK9 157 aaPredicted RBP8.53□□□□□ -1.04
CSMD1-209ENST00000520630 SERTAD1Q9UHV2 236 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 DACH1Q9UI36 760 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 DSEQ9UL01 958 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.53□□□□□ -1.04
CSMD1-209ENST00000520630 NME7Q9Y5B8 376 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 CPQQ9Y646 472 aa8.53□□□□□ -1.04
CSMD1-209ENST00000520630 A0A1B0GTW7 788 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 TEX51A0A1B0GUA7 166 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 ZNF840PA6NDX5 716 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 KPNA7A9QM74 516 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 PRRT4C9JH25 899 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 ANKRD63C9JTQ0 380 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 E9PAM4 449 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 CBX4O00257 560 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 KCNK3O14649 394 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 POLR2DO15514 142 aaKnown RBP8.52□□□□□ -1.05
CSMD1-209ENST00000520630 OAS1P00973 400 aaKnown RBP8.52□□□□□ -1.05
CSMD1-209ENST00000520630 PIGRP01833 764 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 ADH5P11766 374 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 PLS3P13797 630 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 GUCY2CP25092 1073 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 NTSR1P30989 418 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 TAF6P49848 677 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 NCKAP1LP55160 1127 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 ZNF445P59923 1031 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 TLE3Q04726 772 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 KCNB1Q14721 858 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 TMEM132DQ14C87 1099 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 CAMK4Q16566 473 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 CFAP221Q4G0U5 840 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 ARSHQ5FYA8 562 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 INTS6LQ5JSJ4 861 aaKnown RBP8.52□□□□□ -1.05
CSMD1-209ENST00000520630 HAUS3Q68CZ6 603 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 FAM171BQ6P995 826 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 KRBA2Q6ZNG9 492 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 GPR155Q7Z3F1 870 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 ELOA2Q8IYF1 753 aaPredicted RBP8.52□□□□□ -1.05
CSMD1-209ENST00000520630 THEM5Q8N1Q8 247 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 KIAA1958Q8N8K9 716 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 FAM181AQ8N9Y4 354 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 TERB1Q8NA31 727 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 ZSWIM2Q8NEG5 633 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 ERMNQ8TAM6 284 aa8.52□□□□□ -1.05
CSMD1-209ENST00000520630 SYAP1Q96A49 352 aaPredicted RBP8.52□□□□□ -1.05
CSMD1-209ENST00000520630 FAM212AQ96EL1 285 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms