RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 FAM172AQ8WUF8 416 aa16.78■□□□□ 0.28
SNHG6-201ENST00000520348 IGSF21Q96ID5 467 aa16.78■□□□□ 0.28
SNHG6-201ENST00000520348 C8orf48Q96LL4 319 aa16.78■□□□□ 0.28
SNHG6-201ENST00000520348 VN1R3Q9BXE9 311 aa16.78■□□□□ 0.28
SNHG6-201ENST00000520348 POPDC2Q9HBU9 364 aa16.78■□□□□ 0.28
SNHG6-201ENST00000520348 CHST7Q9NS84 486 aa16.78■□□□□ 0.28
SNHG6-201ENST00000520348 HOMER3Q9NSC5 361 aa16.78■□□□□ 0.28
SNHG6-201ENST00000520348 IL37Q9NZH6 218 aa16.78■□□□□ 0.28
SNHG6-201ENST00000520348 MTRRQ9UBK8 725 aa16.78■□□□□ 0.28
SNHG6-201ENST00000520348 BACE2Q9Y5Z0 518 aa16.78■□□□□ 0.28
SNHG6-201ENST00000520348 CEP350Q5VT06 3117 aa16.78■□□□□ 0.28
SNHG6-201ENST00000520348 PLXNA3P51805 1871 aa16.78■□□□□ 0.28
SNHG6-201ENST00000520348 HEXIM1O94992 359 aaKnown RBP16.77■□□□□ 0.28
SNHG6-201ENST00000520348 ZBED1O96006 694 aa16.77■□□□□ 0.28
SNHG6-201ENST00000520348 KDELR1P24390 212 aa16.77■□□□□ 0.28
SNHG6-201ENST00000520348 GJC1P36383 396 aa16.77■□□□□ 0.28
SNHG6-201ENST00000520348 COILP38432 576 aaPredicted RBP16.77■□□□□ 0.28
SNHG6-201ENST00000520348 GPR17Q13304 367 aa16.77■□□□□ 0.28
SNHG6-201ENST00000520348 SLC39A12Q504Y0 691 aa16.77■□□□□ 0.28
SNHG6-201ENST00000520348 RAB6CQ53S08 254 aa16.77■□□□□ 0.28
SNHG6-201ENST00000520348 DRICH1Q6PGQ1 229 aaPredicted RBP16.77■□□□□ 0.28
SNHG6-201ENST00000520348 CCNI2Q6ZMN8 369 aaPredicted RBP16.77■□□□□ 0.28
SNHG6-201ENST00000520348 PSTKQ8IV42 348 aaKnown RBP16.77■□□□□ 0.28
SNHG6-201ENST00000520348 C2orf15Q8WU43 125 aaKnown RBP16.77■□□□□ 0.28
SNHG6-201ENST00000520348 PIK3R5Q8WYR1 880 aa16.77■□□□□ 0.28
SNHG6-201ENST00000520348 RNF25Q96BH1 459 aaPredicted RBP16.77■□□□□ 0.28
SNHG6-201ENST00000520348 PGAP3Q96FM1 320 aaPredicted RBP16.77■□□□□ 0.28
SNHG6-201ENST00000520348 TTPALQ9BTX7 342 aa16.77■□□□□ 0.28
SNHG6-201ENST00000520348 DCLK3Q9C098 648 aa16.77■□□□□ 0.28
SNHG6-201ENST00000520348 RAB6CQ9H0N0 254 aa16.77■□□□□ 0.28
SNHG6-201ENST00000520348 KLHL11Q9NVR0 708 aa16.77■□□□□ 0.28
SNHG6-201ENST00000520348 RRN3Q9NYV6 651 aa16.77■□□□□ 0.28
SNHG6-201ENST00000520348 AMACRQ9UHK6 382 aa16.77■□□□□ 0.28
SNHG6-201ENST00000520348 FAM92AA1XBS5 289 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 LRRD1A4D1F6 860 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 YJEFN3A6XGL0 299 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 E7ENQ6 273 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 PI4K2BG5E9Z4 385 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 PRPSAP2O60256 369 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 VNN2O95498 520 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 OR4Q2P0C623 313 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 TFE3P19532 575 aaPredicted RBP16.76■□□□□ 0.27
SNHG6-201ENST00000520348 SMC1AQ14683 1233 aaKnown RBP16.76■□□□□ 0.27
SNHG6-201ENST00000520348 PDK2Q15119 407 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 CCNG2Q16589 344 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 BEND6Q5SZJ8 279 aaPredicted RBP16.76■□□□□ 0.27
SNHG6-201ENST00000520348 SLC8B1Q6J4K2 584 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 HFE2Q6ZVN8 426 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 BBS12Q6ZW61 710 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 C16orf59Q7L2K0 433 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 CCDC50Q8IVM0 306 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 MAGOHBQ96A72 148 aaKnown RBP16.76■□□□□ 0.27
SNHG6-201ENST00000520348 FAF2Q96CS3 445 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 TRIM62Q9BVG3 475 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 HERC2P3Q9BVR0 1158 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 FRMD8P1Q9BZ68 369 aaPredicted RBP16.76■□□□□ 0.27
SNHG6-201ENST00000520348 ZWILCHQ9H900 591 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 NGRNQ9NPE2 291 aaKnown RBP16.76■□□□□ 0.27
SNHG6-201ENST00000520348 STAP1Q9ULZ2 295 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 PCDHB5Q9Y5E4 795 aa16.76■□□□□ 0.27
SNHG6-201ENST00000520348 MTMR11A4FU01 709 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 NT5C1B-RDH14C9J2C7 533 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 TRIM66O15016 1216 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 ERLIN1O75477 346 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 UPP2O95045 317 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 TJP3O95049 919 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 LTFP02788 710 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 LAG3P18627 525 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 EN2P19622 333 aaPredicted RBP16.75■□□□□ 0.27
SNHG6-201ENST00000520348 CYP2F1P24903 491 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 PBX3P40426 434 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 ALDH7A1P49419 539 aaKnown RBP16.75■□□□□ 0.27
SNHG6-201ENST00000520348 SLC5A3P53794 718 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 HTRA4P83105 476 aaPredicted RBP16.75■□□□□ 0.27
SNHG6-201ENST00000520348 ATP11AP98196 1134 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 SLC7A5Q01650 507 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 ADCY2Q08462 1091 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 PPIGQ13427 754 aaKnown RBP eCLIP16.75■□□□□ 0.27
SNHG6-201ENST00000520348 DPYSL2Q16555 572 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 USP41Q3LFD5 358 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 KCNT2Q6UVM3 1135 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 RSPO2Q6UXX9 243 aaPredicted RBP16.75■□□□□ 0.27
SNHG6-201ENST00000520348 ADAT2Q7Z6V5 191 aaKnown RBP16.75■□□□□ 0.27
SNHG6-201ENST00000520348 JAMLQ86YT9 394 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 IFT20Q8IY31 132 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 GPR65Q8IYL9 337 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 SPPL2BQ8TCT7 592 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 AENQ8WTP8 325 aaKnown RBP16.75■□□□□ 0.27
SNHG6-201ENST00000520348 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.75■□□□□ 0.27
SNHG6-201ENST00000520348 NDRG1Q92597 394 aaKnown RBP16.75■□□□□ 0.27
SNHG6-201ENST00000520348 FAM149B1Q96BN6 582 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 ACSF2Q96CM8 615 aaPredicted RBP16.75■□□□□ 0.27
SNHG6-201ENST00000520348 CEP295NLQ96MC4 621 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 ZNF558Q96NG5 402 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 SLC9A7Q96T83 725 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 SNRNP25Q9BV90 132 aaKnown RBP16.75■□□□□ 0.27
SNHG6-201ENST00000520348 ZNF446Q9NWS9 450 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 CALCOCO1Q9P1Z2 691 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 PCSK1NQ9UHG2 260 aa16.75■□□□□ 0.27
SNHG6-201ENST00000520348 R3HDM2Q9Y2K5 976 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms