RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 ZNF394Q53GI3 561 aa10.54□□□□□ -0.72
SH2D4A-204ENST00000519207 TMEM63BQ5T3F8 832 aa10.54□□□□□ -0.72
SH2D4A-204ENST00000519207 RNASEH2BQ5TBB1 312 aaKnown RBP10.54□□□□□ -0.72
SH2D4A-204ENST00000519207 SNX30Q5VWJ9 437 aa10.54□□□□□ -0.72
SH2D4A-204ENST00000519207 RGS9BPQ6ZS82 235 aa10.54□□□□□ -0.72
SH2D4A-204ENST00000519207 SRRM1Q8IYB3 904 aaKnown RBP10.54□□□□□ -0.72
SH2D4A-204ENST00000519207 ANKRD42Q8N9B4 389 aa10.54□□□□□ -0.72
SH2D4A-204ENST00000519207 GLIS1Q8NBF1 620 aa10.54□□□□□ -0.72
SH2D4A-204ENST00000519207 BCO2Q9BYV7 579 aa10.54□□□□□ -0.72
SH2D4A-204ENST00000519207 SENP1Q9P0U3 644 aa10.54□□□□□ -0.72
SH2D4A-204ENST00000519207 STARD13Q9Y3M8 1113 aa10.54□□□□□ -0.72
SH2D4A-204ENST00000519207 EXOC1LA0A1B0GW35 172 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 FAM47DPA6NHR8 397 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 RASA4BC9J798 803 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 NOP56O00567 594 aaKnown RBP10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 RASA4O43374 803 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 ATP9BO43861 1147 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 HNRNPCL1O60812 293 aaKnown RBP10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 ENTPD5O75356 428 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 TMCC1O94876 653 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 PABPC4LP0CB38 370 aaKnown RBP10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 FAM200BP0CF97 657 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 KRT3P12035 628 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 DESP17661 470 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 TAC1P20366 129 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 PSMA2P25787 234 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 MARK3P27448 753 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 IL9RQ01113 521 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 SLC25A11Q02978 314 aaKnown RBP10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 AP1B1Q10567 949 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 ACAP1Q15027 740 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 HADHQ16836 314 aaKnown RBP10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 WDR72Q3MJ13 1102 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 PTPN20Q4JDL3 420 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 LIN52Q52LA3 116 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 TXNRD3NBQ6F5E7 133 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 DENND1BQ6P3S1 775 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 CENPUQ71F23 418 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 PRUNE1Q86TP1 453 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 TRABD2AQ86V40 505 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 THNSL1Q8IYQ7 743 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 LRRC71Q8N4P6 559 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 LRRC8CQ8TDW0 803 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 SCG3Q8WXD2 468 aaKnown RBP10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 SPOCK2Q92563 424 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 NFKBIZQ9BYH8 718 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 MIS12Q9H081 205 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 IL1RAPL1Q9NZN1 696 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 FETUBQ9UGM5 382 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 TBK1Q9UHD2 729 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 TNFSF13BQ9Y275 285 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 KIAA0100Q14667 2235 aaKnown RBP10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 MGAMO43451 1857 aa10.53□□□□□ -0.72
SH2D4A-204ENST00000519207 A0A0G2JLL6 359 aaPredicted RBP10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 PRPF4O43172 522 aaKnown RBP eCLIP10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 HBP1O60381 514 aa10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 PEX10O60683 326 aa10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 ARIH2O95376 493 aa10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 ASLP04424 464 aa10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 LYNP07948 512 aa10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 ZSCAN5DPP0CG00 497 aa10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 GCAP28676 217 aa10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 RFC1P35251 1148 aaPredicted RBP10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 PHEXP78562 749 aa10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 POU5F1BQ06416 359 aa10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 TAF1CQ15572 869 aaPredicted RBP10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 HSDL1Q3SXM5 330 aa10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 KHDC1Q4VXA5 237 aaKnown RBP10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 ZNF667Q5HYK9 610 aa10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 CYP4A22Q5TCH4 519 aa10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 SCARA5Q6ZMJ2 495 aa10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 BBS12Q6ZW61 710 aa10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 PRRT2Q7Z6L0 340 aaPredicted RBP10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 RHPN2Q8IUC4 686 aa10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 SMYD1Q8NB12 490 aa10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 GBP5Q96PP8 586 aa10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 TGS1Q96RS0 853 aaKnown RBP10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 SMARCAD1Q9H4L7 1026 aa10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 RPF1Q9H9Y2 349 aaKnown RBP10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 SLC24A2Q9UI40 661 aa10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 AGTPBP1Q9UPW5 1226 aa10.52□□□□□ -0.72
SH2D4A-204ENST00000519207 EVPLQ92817 2033 aa10.52□□□□□ -0.73
SH2D4A-204ENST00000519207 INO80B-WBP1J3KQ70 363 aa10.52□□□□□ -0.73
SH2D4A-204ENST00000519207 SGK1O00141 431 aa10.52□□□□□ -0.73
SH2D4A-204ENST00000519207 LRCH4O75427 683 aa10.52□□□□□ -0.73
SH2D4A-204ENST00000519207 CNMDO75829 334 aa10.52□□□□□ -0.73
SH2D4A-204ENST00000519207 GH1P01241 217 aa10.52□□□□□ -0.73
SH2D4A-204ENST00000519207 SPATA31D3P0C874 917 aa10.52□□□□□ -0.73
SH2D4A-204ENST00000519207 ETS1P14921 441 aa10.52□□□□□ -0.73
SH2D4A-204ENST00000519207 PTPN4P29074 926 aa10.52□□□□□ -0.73
SH2D4A-204ENST00000519207 EPHB2P29323 1055 aa10.52□□□□□ -0.73
SH2D4A-204ENST00000519207 RASSF2P50749 326 aa10.52□□□□□ -0.73
SH2D4A-204ENST00000519207 USP46P62068 366 aa10.52□□□□□ -0.73
SH2D4A-204ENST00000519207 PLCB3Q01970 1234 aa10.52□□□□□ -0.73
SH2D4A-204ENST00000519207 TMED2Q15363 201 aa10.52□□□□□ -0.73
SH2D4A-204ENST00000519207 GADL1Q6ZQY3 521 aa10.52□□□□□ -0.73
SH2D4A-204ENST00000519207 SPATA31D4Q6ZUB0 917 aa10.52□□□□□ -0.73
SH2D4A-204ENST00000519207 EEPD1Q7L9B9 569 aa10.52□□□□□ -0.73
SH2D4A-204ENST00000519207 TRIM50Q86XT4 487 aa10.52□□□□□ -0.73
SH2D4A-204ENST00000519207 ERO1BQ86YB8 467 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms