RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 FAM92AA1XBS5 289 aa14.5□□□□□ -0.09
VDAC3-204ENST00000519072 CUTAO60888 179 aa14.5□□□□□ -0.09
VDAC3-204ENST00000519072 ZDHHC11BP0C7U3 371 aa14.5□□□□□ -0.09
VDAC3-204ENST00000519072 DPP6P42658 865 aa14.5□□□□□ -0.09
VDAC3-204ENST00000519072 TUBP50607 506 aa14.5□□□□□ -0.09
VDAC3-204ENST00000519072 LMAN2Q12907 356 aa14.5□□□□□ -0.09
VDAC3-204ENST00000519072 MAP7D1Q3KQU3 841 aa14.5□□□□□ -0.09
VDAC3-204ENST00000519072 TRIM61Q5EBN2 209 aa14.5□□□□□ -0.09
VDAC3-204ENST00000519072 SHC4Q6S5L8 630 aa14.5□□□□□ -0.09
VDAC3-204ENST00000519072 PAQR9Q6ZVX9 377 aa14.5□□□□□ -0.09
VDAC3-204ENST00000519072 FAM35AQ86V20 835 aa14.5□□□□□ -0.09
VDAC3-204ENST00000519072 SYT12Q8IV01 421 aa14.5□□□□□ -0.09
VDAC3-204ENST00000519072 ETFBKMTQ8IXQ9 262 aa14.5□□□□□ -0.09
VDAC3-204ENST00000519072 KCNV2Q8TDN2 545 aa14.5□□□□□ -0.09
VDAC3-204ENST00000519072 HMGB4Q8WW32 186 aa14.5□□□□□ -0.09
VDAC3-204ENST00000519072 ZNF396Q96N95 335 aaPredicted RBP14.5□□□□□ -0.09
VDAC3-204ENST00000519072 MAGEF1Q9HAY2 307 aa14.5□□□□□ -0.09
VDAC3-204ENST00000519072 ZDHHC4Q9NPG8 344 aa14.5□□□□□ -0.09
VDAC3-204ENST00000519072 COMMD8Q9NX08 183 aa14.5□□□□□ -0.09
VDAC3-204ENST00000519072 BCCIPQ9P287 314 aaKnown RBP eCLIP14.5□□□□□ -0.09
VDAC3-204ENST00000519072 CHORDC1Q9UHD1 332 aaPredicted RBP14.5□□□□□ -0.09
VDAC3-204ENST00000519072 MBD1Q9UIS9 605 aaPredicted RBP14.5□□□□□ -0.09
VDAC3-204ENST00000519072 SH3BP1Q9Y3L3 701 aa14.5□□□□□ -0.09
VDAC3-204ENST00000519072 PKD1L2Q7Z442 2459 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 SPEGQ15772 3267 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 HOXC11O43248 304 aaPredicted RBP14.49□□□□□ -0.09
VDAC3-204ENST00000519072 EXOC3O60645 756 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 PHACTR2O75167 634 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 TULP3O75386 442 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 YEATS4O95619 227 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 PTGER3P43115 390 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 AP3M2P53677 418 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 SLC5A3P53794 718 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 CDH8P55286 799 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 FOXC1Q12948 553 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 ZNF699Q32M78 642 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 PREPLQ4J6C6 727 aaPredicted RBP14.49□□□□□ -0.09
VDAC3-204ENST00000519072 ZNF667Q5HYK9 610 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 PEAR1Q5VY43 1037 aaPredicted RBP14.49□□□□□ -0.09
VDAC3-204ENST00000519072 BTBD8Q5XKL5 378 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 UNQ6494/PRO21346Q6UXR6 183 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 TRMT11Q7Z4G4 463 aaKnown RBP14.49□□□□□ -0.09
VDAC3-204ENST00000519072 TMEFF1Q8IYR6 380 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 FRMD1Q8N878 549 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 SCAMP5Q8TAC9 235 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 PLEKHO2Q8TD55 490 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 SMARCD1Q96GM5 515 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 TNIP3Q96KP6 325 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 MED10Q9BTT4 135 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 NUSAP1Q9BXS6 441 aaKnown RBP14.49□□□□□ -0.09
VDAC3-204ENST00000519072 SMYD3Q9H7B4 428 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 CCSER2Q9H7U1 834 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 DMAP1Q9NPF5 467 aaPredicted RBP14.49□□□□□ -0.09
VDAC3-204ENST00000519072 DEC1Q9P2X7 70 aa14.49□□□□□ -0.09
VDAC3-204ENST00000519072 TFIP11Q9UBB9 837 aaKnown RBP14.49□□□□□ -0.09
VDAC3-204ENST00000519072 CIZ1Q9ULV3 898 aaPredicted RBP14.49□□□□□ -0.09
VDAC3-204ENST00000519072 PVALEFA0A1B0GWK0 134 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 TCRBV21S2A2A0A5A6 115 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 TBC1D3BA6NDS4 549 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 C1QTNF9BB2RNN3 333 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 CENPBP07199 599 aaPredicted RBP14.48□□□□□ -0.09
VDAC3-204ENST00000519072 C1QTNF9P0C862 333 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 HOXD12P35452 270 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 CASP4P49662 377 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 CLDN10P78369 228 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 BIRC3Q13489 604 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 KNOP1Q1ED39 458 aaKnown RBP14.48□□□□□ -0.09
VDAC3-204ENST00000519072 UAP1L1Q3KQV9 507 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 LYSMD4Q5XG99 296 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 SLC23A3Q6PIS1 610 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 NUDT18Q6ZVK8 323 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 ARMCX6Q7L4S7 300 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 BBS7Q8IWZ6 715 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 FUKQ8N0W3 1084 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 PGBD3Q8N328 593 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 ZNF513Q8N8E2 541 aaPredicted RBP14.48□□□□□ -0.09
VDAC3-204ENST00000519072 NAT16Q8N8M0 369 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 TERB1Q8NA31 727 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 PARD3BQ8TEW8 1205 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 BLZF1Q9H2G9 400 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 SLC39A2Q9NP94 309 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 SPHK2Q9NRA0 654 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 TMEM74BQ9NUR3 256 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 GMIPQ9P107 970 aa14.48□□□□□ -0.09
VDAC3-204ENST00000519072 DSPP15924 2871 aaKnown RBP14.48□□□□□ -0.09
VDAC3-204ENST00000519072 PCDH15Q96QU1 1955 aa14.47□□□□□ -0.09
VDAC3-204ENST00000519072 LRRIQ3A6PVS8 624 aaPredicted RBP14.47□□□□□ -0.09
VDAC3-204ENST00000519072 POLR2DO15514 142 aaKnown RBP14.47□□□□□ -0.09
VDAC3-204ENST00000519072 AP1G2O75843 785 aa14.47□□□□□ -0.09
VDAC3-204ENST00000519072 C4BPAP04003 597 aaKnown RBP14.47□□□□□ -0.09
VDAC3-204ENST00000519072 ENGP17813 658 aa14.47□□□□□ -0.09
VDAC3-204ENST00000519072 CASP1P29466 404 aa14.47□□□□□ -0.09
VDAC3-204ENST00000519072 NCOA4Q13772 614 aa14.47□□□□□ -0.09
VDAC3-204ENST00000519072 SCARA5Q6ZMJ2 495 aa14.47□□□□□ -0.09
VDAC3-204ENST00000519072 TMEM25Q86YD3 366 aa14.47□□□□□ -0.09
VDAC3-204ENST00000519072 KDF1Q8NAX2 398 aaPredicted RBP14.47□□□□□ -0.09
VDAC3-204ENST00000519072 DEFB124Q8NES8 71 aa14.47□□□□□ -0.09
VDAC3-204ENST00000519072 ZMIZ2Q8NF64 920 aa14.47□□□□□ -0.09
VDAC3-204ENST00000519072 GOLGA5Q8TBA6 731 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms