RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 MRFAP1Q9Y605 127 aa11.09□□□□□ -0.63
PABPC1-203ENST00000517921 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.08□□□□□ -0.64
PABPC1-203ENST00000517921 YJEFN3A6XGL0 299 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 E7ENQ6 273 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 FSCN2O14926 492 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 SART1O43290 800 aaKnown RBP11.08□□□□□ -0.64
PABPC1-203ENST00000517921 SEC24AO95486 1093 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 ZBED1O96006 694 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 FYNP06241 537 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 RB1P06400 928 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 GLI1P08151 1106 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 CNPP09543 421 aaKnown RBP11.08□□□□□ -0.64
PABPC1-203ENST00000517921 ATF2P15336 505 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 ATF6P18850 670 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 DNAJB1P25685 340 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 CTNNA1P35221 906 aaKnown RBP11.08□□□□□ -0.64
PABPC1-203ENST00000517921 DNA2P51530 1060 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 TAS2R40P59535 323 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 ERVFC1P60507 584 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 ERVK-21P61565 698 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 UBE3AQ05086 875 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 GRIN2CQ14957 1233 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 DDR2Q16832 855 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 CCDC14Q49A88 953 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 PLPP4Q5VZY2 271 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 TMC7Q7Z402 723 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 NUP93Q8N1F7 819 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 ARFGAP1Q8N6T3 406 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 UBE2Q2Q8WVN8 375 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 POF1BQ8WVV4 589 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 SPATA17Q96L03 361 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 SLC2A13Q96QE2 648 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 TGS1Q96RS0 853 aaKnown RBP11.08□□□□□ -0.64
PABPC1-203ENST00000517921 OSBPL9Q96SU4 736 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 PSMB7Q99436 277 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 GAS2L1Q99501 681 aaPredicted RBP11.08□□□□□ -0.64
PABPC1-203ENST00000517921 TCF25Q9BQ70 676 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 CNPY3Q9BT09 278 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 C11orf84Q9BUA3 381 aaPredicted RBP11.08□□□□□ -0.64
PABPC1-203ENST00000517921 L2HGDHQ9H9P8 463 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 ENTPD7Q9NQZ7 604 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 TLR9Q9NR96 1032 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 IL37Q9NZH6 218 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 HSFX1Q9UBD0 423 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 USTQ9Y2C2 406 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 YIPF1Q9Y548 306 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 IRAK3Q9Y616 596 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 SAR1BQ9Y6B6 198 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 NUP205Q92621 2012 aa11.08□□□□□ -0.64
PABPC1-203ENST00000517921 REV3LO60673 3130 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 MIF4GDA9UHW6 222 aaKnown RBP11.07□□□□□ -0.64
PABPC1-203ENST00000517921 GRM6O15303 877 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 PSTPIP1O43586 416 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 SRGAP2O75044 1071 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 LRCH4O75427 683 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 CXCL14O95715 111 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 LTFP02788 710 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 TCF4P15884 667 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 PDGFRAP16234 1089 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 PRLRP16471 622 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 TCP1P17987 556 aaKnown RBP11.07□□□□□ -0.64
PABPC1-203ENST00000517921 TFE3P19532 575 aaPredicted RBP11.07□□□□□ -0.64
PABPC1-203ENST00000517921 SDC4P31431 198 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 CXCR5P32302 372 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 CA8P35219 290 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 PTPN9P43378 593 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 USP46P62068 366 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 RPL10AP62906 217 aaKnown RBP11.07□□□□□ -0.64
PABPC1-203ENST00000517921 SLC25A11Q02978 314 aaKnown RBP11.07□□□□□ -0.64
PABPC1-203ENST00000517921 IFRD2Q12894 506 aaPredicted RBP11.07□□□□□ -0.64
PABPC1-203ENST00000517921 SMC1AQ14683 1233 aaKnown RBP11.07□□□□□ -0.64
PABPC1-203ENST00000517921 ACAP1Q15027 740 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 C15orf59Q2T9L4 293 aaPredicted RBP11.07□□□□□ -0.64
PABPC1-203ENST00000517921 RAB6CQ53S08 254 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 SH3PXD2AQ5TCZ1 1133 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 DCAF12L1Q5VU92 463 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 OTUD1Q5VV17 481 aaPredicted RBP11.07□□□□□ -0.64
PABPC1-203ENST00000517921 CC2D1AQ6P1N0 951 aaPredicted RBP11.07□□□□□ -0.64
PABPC1-203ENST00000517921 DENND5BQ6ZUT9 1274 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 DEFB106AQ8N104 65 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 MAFAQ8NHW3 353 aaPredicted RBP11.07□□□□□ -0.64
PABPC1-203ENST00000517921 GPR152Q8TDT2 470 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 COG1Q8WTW3 980 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 ALG3Q92685 438 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 CEP295NLQ96MC4 621 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 CFAP57Q96MR6 1250 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 DDX23Q9BUQ8 820 aaKnown RBP11.07□□□□□ -0.64
PABPC1-203ENST00000517921 ADAM33Q9BZ11 813 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 RAB6CQ9H0N0 254 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 NKX2-4Q9H2Z4 354 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 POPDC2Q9HBU9 364 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.07□□□□□ -0.64
PABPC1-203ENST00000517921 CDC23Q9UJX2 597 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 SCML2Q9UQR0 700 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 SHROOM3Q8TF72 1996 aa11.07□□□□□ -0.64
PABPC1-203ENST00000517921 NUP210Q8TEM1 1887 aaPredicted RBP11.06□□□□□ -0.64
PABPC1-203ENST00000517921 FAM92AA1XBS5 289 aa11.06□□□□□ -0.64
PABPC1-203ENST00000517921 CCDC66A2RUB6 948 aa11.06□□□□□ -0.64
PABPC1-203ENST00000517921 C2orf71A6NGG8 1288 aa11.06□□□□□ -0.64
PABPC1-203ENST00000517921 SLC38A8A6NNN8 435 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms