RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 ZNF518BQ9C0D4 1074 aa12.08□□□□□ -0.48
CTNNA1-205ENST00000517904 SLC6A17Q9H1V8 727 aa12.08□□□□□ -0.48
CTNNA1-205ENST00000517904 DPEP3Q9H4B8 488 aa12.08□□□□□ -0.48
CTNNA1-205ENST00000517904 SEL1LQ9UBV2 794 aa12.08□□□□□ -0.48
CTNNA1-205ENST00000517904 KIF3AQ9Y496 699 aa12.08□□□□□ -0.48
CTNNA1-205ENST00000517904 PTPRBP23467 1997 aa12.08□□□□□ -0.48
CTNNA1-205ENST00000517904 H3BQV1 296 aa12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 SYPP08247 313 aa12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 GAP43P17677 238 aa12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 GJB2P29033 226 aa12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 NTSR1P30989 418 aa12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 PLEKHG6Q3KR16 790 aa12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 EGFLAMQ63HQ2 1017 aa12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 HS2ST1Q7LGA3 356 aa12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 TRMT11Q7Z4G4 463 aaKnown RBP12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 CBWD2Q8IUF1 395 aa12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 SYCP3Q8IZU3 236 aa12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 GPD1LQ8N335 351 aa12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 OTUB2Q96DC9 234 aa12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 MMS19Q96T76 1030 aa12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 CCDC86Q9H6F5 360 aaKnown RBP12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 CCSER2Q9H7U1 834 aa12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 OLFML3Q9NRN5 406 aa12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 DEC1Q9P2X7 70 aa12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 STARD13Q9Y3M8 1113 aa12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 ASXL3Q9C0F0 2248 aa12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 CFAP46Q8IYW2 2715 aa12.07□□□□□ -0.48
CTNNA1-205ENST00000517904 URB1O60287 2271 aaKnown RBP12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 CLDN5O00501 218 aa12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 EIF5BO60841 1220 aaKnown RBP12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 CBFA2T3O75081 653 aa12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 ZNF217O75362 1048 aa12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 TNNC2P02585 160 aa12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 PTPN1P18031 435 aaKnown RBP12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 MAOBP27338 520 aa12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 GNL1P36915 607 aaPredicted RBP12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 GRIK2Q13002 908 aa12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 SF3A1Q15459 793 aaKnown RBP12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 ANO4Q32M45 955 aa12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 BTBD8Q5XKL5 378 aa12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 SLCO6A1Q86UG4 719 aa12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 IPO4Q8TEX9 1081 aaKnown RBP12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 HNRNPLLQ8WVV9 542 aaKnown RBP12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 ZNF419Q96HQ0 510 aaPredicted RBP12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 B3GNT5Q9BYG0 378 aa12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 TRIM9Q9C026 710 aa12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 ELOVL4Q9GZR5 314 aa12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 SPHK2Q9NRA0 654 aa12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 STK17AQ9UEE5 414 aa12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 CHORDC1Q9UHD1 332 aaPredicted RBP12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 RAXQ9Y2V3 346 aa12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 SH3BP1Q9Y3L3 701 aa12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 R3HCC1Q9Y3T6 440 aaKnown RBP12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 PCDHB9Q9Y5E1 797 aa12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 PCDHB13Q9Y5F0 798 aa12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 RAD54BQ9Y620 910 aa12.06□□□□□ -0.48
CTNNA1-205ENST00000517904 FRMD3A2A2Y4 597 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 PRRT4C9JH25 899 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 TACC1O75410 805 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 PRPF6O94906 941 aaKnown RBP12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 BMP15O95972 392 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 CST3P01034 146 aaPredicted RBP12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 IRF1P10914 325 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 YWHAQP27348 245 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 DUOXA2Q1HG44 320 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 SNX30Q5VWJ9 437 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 CHPFQ8IZ52 775 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 RGL4Q8IZJ4 473 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 NUP93Q8N1F7 819 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 GLIS3Q8NEA6 775 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 PDZD8Q8NEN9 1154 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 OR6B3Q8NGW1 331 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 SCAMP5Q8TAC9 235 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 OVCA2Q8WZ82 227 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 FBXO32Q969P5 355 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 MRGPRX1Q96LB2 322 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 KCNK16Q96T55 309 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 GABRG3Q99928 467 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 DUSP9Q99956 384 aaKnown RBP12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 SNX25Q9H3E2 840 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 FAM124BQ9H5Z6 455 aaPredicted RBP12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 PCOLCE2Q9UKZ9 415 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 KNL1Q8NG31 2342 aa12.05□□□□□ -0.48
CTNNA1-205ENST00000517904 WASH3PC4AMC7 463 aa12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 GREM1O60565 184 aa12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 RTN3O95197 1032 aaPredicted RBP12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 ZIC2O95409 532 aaPredicted RBP12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 IDEP14735 1019 aa12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 PGFP49763 221 aa12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 ALCAMQ13740 583 aa12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 PREPLQ4J6C6 727 aaPredicted RBP12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 HECTD3Q5T447 861 aa12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 GRAMD4Q6IC98 578 aa12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 TOGARAM2Q6ZUX3 1019 aa12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 SV2BQ7L1I2 683 aa12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 TRAPPC11Q7Z392 1133 aa12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 GLRX5Q86SX6 157 aa12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 WDR49Q8IV35 697 aa12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 LRIG1Q96JA1 1093 aa12.04□□□□□ -0.48
CTNNA1-205ENST00000517904 TMX3Q96JJ7 454 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms